fast.genomicscompare 6,575 genera of bacteria & archaea

 

Roseburia_A porci MUC-530-WT-4D;MUC

Genome identifier: GCF_009695765.1

NCBI assembly name: ASM969576v1

GTDB taxonomy: Bacteria, Bacillota_A, Clostridia, Lachnospirales, Lachnospiraceae, Roseburia_A, Roseburia_A porci

NCBI taxonomy: Bacteria, Bacillota, Clostridia, Eubacteriales, Lachnospiraceae, Roseburia, Roseburia porci

Scaffolds: 61

Genes: 2,867 Protein-coding: 2,745 RNAs: 84 pseudogenes: 38

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_VUNI01000001.1 Roseburia porci strain MUC/MUC-530-WT-4D seq1, whole genome shotgun sequence 258,002
NZ_VUNI01000002.1 Roseburia porci strain MUC/MUC-530-WT-4D seq2, whole genome shotgun sequence 234,886
NZ_VUNI01000003.1 Roseburia porci strain MUC/MUC-530-WT-4D seq3, whole genome shotgun sequence 187,012
NZ_VUNI01000004.1 Roseburia porci strain MUC/MUC-530-WT-4D seq4, whole genome shotgun sequence 168,616
NZ_VUNI01000005.1 Roseburia porci strain MUC/MUC-530-WT-4D seq5, whole genome shotgun sequence 166,496
NZ_VUNI01000006.1 Roseburia porci strain MUC/MUC-530-WT-4D seq6, whole genome shotgun sequence 165,139
NZ_VUNI01000007.1 Roseburia porci strain MUC/MUC-530-WT-4D seq7, whole genome shotgun sequence 126,265
NZ_VUNI01000008.1 Roseburia porci strain MUC/MUC-530-WT-4D seq8, whole genome shotgun sequence 115,707
NZ_VUNI01000009.1 Roseburia porci strain MUC/MUC-530-WT-4D seq9, whole genome shotgun sequence 98,086
NZ_VUNI01000010.1 Roseburia porci strain MUC/MUC-530-WT-4D seq10, whole genome shotgun sequence 94,143
NZ_VUNI01000011.1 Roseburia porci strain MUC/MUC-530-WT-4D seq11, whole genome shotgun sequence 91,368
NZ_VUNI01000012.1 Roseburia porci strain MUC/MUC-530-WT-4D seq12, whole genome shotgun sequence 89,565
NZ_VUNI01000013.1 Roseburia porci strain MUC/MUC-530-WT-4D seq13, whole genome shotgun sequence 86,988
NZ_VUNI01000014.1 Roseburia porci strain MUC/MUC-530-WT-4D seq14, whole genome shotgun sequence 79,405
NZ_VUNI01000015.1 Roseburia porci strain MUC/MUC-530-WT-4D seq15, whole genome shotgun sequence 79,340
NZ_VUNI01000016.1 Roseburia porci strain MUC/MUC-530-WT-4D seq16, whole genome shotgun sequence 73,255
NZ_VUNI01000017.1 Roseburia porci strain MUC/MUC-530-WT-4D seq17, whole genome shotgun sequence 67,104
NZ_VUNI01000018.1 Roseburia porci strain MUC/MUC-530-WT-4D seq18, whole genome shotgun sequence 65,705
NZ_VUNI01000019.1 Roseburia porci strain MUC/MUC-530-WT-4D seq19, whole genome shotgun sequence 61,456
NZ_VUNI01000020.1 Roseburia porci strain MUC/MUC-530-WT-4D seq20, whole genome shotgun sequence 60,068
NZ_VUNI01000021.1 Roseburia porci strain MUC/MUC-530-WT-4D seq21, whole genome shotgun sequence 56,511
NZ_VUNI01000022.1 Roseburia porci strain MUC/MUC-530-WT-4D seq22, whole genome shotgun sequence 47,812
NZ_VUNI01000023.1 Roseburia porci strain MUC/MUC-530-WT-4D seq23, whole genome shotgun sequence 46,183
NZ_VUNI01000024.1 Roseburia porci strain MUC/MUC-530-WT-4D seq24, whole genome shotgun sequence 45,625
NZ_VUNI01000025.1 Roseburia porci strain MUC/MUC-530-WT-4D seq25, whole genome shotgun sequence 41,123
NZ_VUNI01000026.1 Roseburia porci strain MUC/MUC-530-WT-4D seq26, whole genome shotgun sequence 38,202
NZ_VUNI01000027.1 Roseburia porci strain MUC/MUC-530-WT-4D seq27, whole genome shotgun sequence 36,631
NZ_VUNI01000028.1 Roseburia porci strain MUC/MUC-530-WT-4D seq28, whole genome shotgun sequence 33,038
NZ_VUNI01000029.1 Roseburia porci strain MUC/MUC-530-WT-4D seq29, whole genome shotgun sequence 30,136
NZ_VUNI01000030.1 Roseburia porci strain MUC/MUC-530-WT-4D seq30, whole genome shotgun sequence 24,845
NZ_VUNI01000031.1 Roseburia porci strain MUC/MUC-530-WT-4D seq31, whole genome shotgun sequence 23,703
NZ_VUNI01000032.1 Roseburia porci strain MUC/MUC-530-WT-4D seq32, whole genome shotgun sequence 23,456
NZ_VUNI01000033.1 Roseburia porci strain MUC/MUC-530-WT-4D seq33, whole genome shotgun sequence 22,787
NZ_VUNI01000034.1 Roseburia porci strain MUC/MUC-530-WT-4D seq34, whole genome shotgun sequence 16,696
NZ_VUNI01000035.1 Roseburia porci strain MUC/MUC-530-WT-4D seq35, whole genome shotgun sequence 15,397
NZ_VUNI01000036.1 Roseburia porci strain MUC/MUC-530-WT-4D seq36, whole genome shotgun sequence 13,310
NZ_VUNI01000037.1 Roseburia porci strain MUC/MUC-530-WT-4D seq37, whole genome shotgun sequence 13,062
NZ_VUNI01000038.1 Roseburia porci strain MUC/MUC-530-WT-4D seq38, whole genome shotgun sequence 12,547
NZ_VUNI01000039.1 Roseburia porci strain MUC/MUC-530-WT-4D seq39, whole genome shotgun sequence 10,893
NZ_VUNI01000040.1 Roseburia porci strain MUC/MUC-530-WT-4D seq40, whole genome shotgun sequence 8,094
NZ_VUNI01000041.1 Roseburia porci strain MUC/MUC-530-WT-4D seq41, whole genome shotgun sequence 6,271
NZ_VUNI01000042.1 Roseburia porci strain MUC/MUC-530-WT-4D seq42, whole genome shotgun sequence 5,289
NZ_VUNI01000043.1 Roseburia porci strain MUC/MUC-530-WT-4D seq43, whole genome shotgun sequence 4,375
NZ_VUNI01000044.1 Roseburia porci strain MUC/MUC-530-WT-4D seq44, whole genome shotgun sequence 3,644
NZ_VUNI01000045.1 Roseburia porci strain MUC/MUC-530-WT-4D seq45, whole genome shotgun sequence 3,294
NZ_VUNI01000046.1 Roseburia porci strain MUC/MUC-530-WT-4D seq46, whole genome shotgun sequence 3,109
NZ_VUNI01000047.1 Roseburia porci strain MUC/MUC-530-WT-4D seq47, whole genome shotgun sequence 2,908
NZ_VUNI01000048.1 Roseburia porci strain MUC/MUC-530-WT-4D seq48, whole genome shotgun sequence 2,784
NZ_VUNI01000049.1 Roseburia porci strain MUC/MUC-530-WT-4D seq49, whole genome shotgun sequence 2,674
NZ_VUNI01000050.1 Roseburia porci strain MUC/MUC-530-WT-4D seq51, whole genome shotgun sequence 1,878
NZ_VUNI01000051.1 Roseburia porci strain MUC/MUC-530-WT-4D seq52, whole genome shotgun sequence 1,839
NZ_VUNI01000052.1 Roseburia porci strain MUC/MUC-530-WT-4D seq53, whole genome shotgun sequence 1,800
NZ_VUNI01000053.1 Roseburia porci strain MUC/MUC-530-WT-4D seq54, whole genome shotgun sequence 1,732
NZ_VUNI01000054.1 Roseburia porci strain MUC/MUC-530-WT-4D seq55, whole genome shotgun sequence 1,681
NZ_VUNI01000055.1 Roseburia porci strain MUC/MUC-530-WT-4D seq56, whole genome shotgun sequence 1,587
NZ_VUNI01000056.1 Roseburia porci strain MUC/MUC-530-WT-4D seq57, whole genome shotgun sequence 1,544
NZ_VUNI01000057.1 Roseburia porci strain MUC/MUC-530-WT-4D seq58, whole genome shotgun sequence 1,541
NZ_VUNI01000058.1 Roseburia porci strain MUC/MUC-530-WT-4D seq59, whole genome shotgun sequence 1,533
NZ_VUNI01000059.1 Roseburia porci strain MUC/MUC-530-WT-4D seq60, whole genome shotgun sequence 1,349
NZ_VUNI01000060.1 Roseburia porci strain MUC/MUC-530-WT-4D seq61, whole genome shotgun sequence 1,349
NZ_VUNI01000061.1 Roseburia porci strain MUC/MUC-530-WT-4D seq62, whole genome shotgun sequence 1,166

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory