fast.genomicscompare 6,575 genera of bacteria & archaea

 

Acetatifactor intestinalis WCA3-601-WT-6H

Genome identifier: GCF_009695995.1

NCBI assembly name: ASM969599v1

GTDB taxonomy: Bacteria, Bacillota_A, Clostridia, Lachnospirales, Lachnospiraceae, Acetatifactor, Acetatifactor intestinalis

NCBI taxonomy: Bacteria, Bacillota, Clostridia, Eubacteriales, Lachnospiraceae, Waltera, Waltera intestinalis

Scaffolds: 46

Genes: 2,798 Protein-coding: 2,696 RNAs: 64 pseudogenes: 38

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_VUMU01000001.1 Waltera intestinalis strain WCA3-601-WT-6H seq1, whole genome shotgun sequence 372,680
NZ_VUMU01000002.1 Waltera intestinalis strain WCA3-601-WT-6H seq2, whole genome shotgun sequence 345,911
NZ_VUMU01000003.1 Waltera intestinalis strain WCA3-601-WT-6H seq3, whole genome shotgun sequence 300,769
NZ_VUMU01000004.1 Waltera intestinalis strain WCA3-601-WT-6H seq4, whole genome shotgun sequence 180,718
NZ_VUMU01000005.1 Waltera intestinalis strain WCA3-601-WT-6H seq5, whole genome shotgun sequence 179,663
NZ_VUMU01000006.1 Waltera intestinalis strain WCA3-601-WT-6H seq6, whole genome shotgun sequence 168,705
NZ_VUMU01000007.1 Waltera intestinalis strain WCA3-601-WT-6H seq7, whole genome shotgun sequence 138,034
NZ_VUMU01000008.1 Waltera intestinalis strain WCA3-601-WT-6H seq8, whole genome shotgun sequence 115,908
NZ_VUMU01000009.1 Waltera intestinalis strain WCA3-601-WT-6H seq9, whole genome shotgun sequence 101,911
NZ_VUMU01000010.1 Waltera intestinalis strain WCA3-601-WT-6H seq10, whole genome shotgun sequence 97,303
NZ_VUMU01000011.1 Waltera intestinalis strain WCA3-601-WT-6H seq11, whole genome shotgun sequence 96,886
NZ_VUMU01000012.1 Waltera intestinalis strain WCA3-601-WT-6H seq12, whole genome shotgun sequence 95,987
NZ_VUMU01000013.1 Waltera intestinalis strain WCA3-601-WT-6H seq13, whole genome shotgun sequence 90,158
NZ_VUMU01000014.1 Waltera intestinalis strain WCA3-601-WT-6H seq14, whole genome shotgun sequence 85,756
NZ_VUMU01000015.1 Waltera intestinalis strain WCA3-601-WT-6H seq15, whole genome shotgun sequence 84,554
NZ_VUMU01000016.1 Waltera intestinalis strain WCA3-601-WT-6H seq16, whole genome shotgun sequence 81,944
NZ_VUMU01000017.1 Waltera intestinalis strain WCA3-601-WT-6H seq17, whole genome shotgun sequence 74,174
NZ_VUMU01000018.1 Waltera intestinalis strain WCA3-601-WT-6H seq18, whole genome shotgun sequence 74,093
NZ_VUMU01000019.1 Waltera intestinalis strain WCA3-601-WT-6H seq19, whole genome shotgun sequence 67,403
NZ_VUMU01000020.1 Waltera intestinalis strain WCA3-601-WT-6H seq20, whole genome shotgun sequence 54,941
NZ_VUMU01000021.1 Waltera intestinalis strain WCA3-601-WT-6H seq21, whole genome shotgun sequence 47,231
NZ_VUMU01000022.1 Waltera intestinalis strain WCA3-601-WT-6H seq22, whole genome shotgun sequence 20,451
NZ_VUMU01000023.1 Waltera intestinalis strain WCA3-601-WT-6H seq23, whole genome shotgun sequence 17,361
NZ_VUMU01000024.1 Waltera intestinalis strain WCA3-601-WT-6H seq24, whole genome shotgun sequence 11,993
NZ_VUMU01000025.1 Waltera intestinalis strain WCA3-601-WT-6H seq25, whole genome shotgun sequence 11,600
NZ_VUMU01000026.1 Waltera intestinalis strain WCA3-601-WT-6H seq26, whole genome shotgun sequence 9,918
NZ_VUMU01000027.1 Waltera intestinalis strain WCA3-601-WT-6H seq27, whole genome shotgun sequence 5,672
NZ_VUMU01000028.1 Waltera intestinalis strain WCA3-601-WT-6H seq28, whole genome shotgun sequence 5,652
NZ_VUMU01000029.1 Waltera intestinalis strain WCA3-601-WT-6H seq30, whole genome shotgun sequence 3,931
NZ_VUMU01000030.1 Waltera intestinalis strain WCA3-601-WT-6H seq31, whole genome shotgun sequence 3,030
NZ_VUMU01000031.1 Waltera intestinalis strain WCA3-601-WT-6H seq32, whole genome shotgun sequence 2,900
NZ_VUMU01000032.1 Waltera intestinalis strain WCA3-601-WT-6H seq33, whole genome shotgun sequence 2,688
NZ_VUMU01000033.1 Waltera intestinalis strain WCA3-601-WT-6H seq34, whole genome shotgun sequence 1,996
NZ_VUMU01000034.1 Waltera intestinalis strain WCA3-601-WT-6H seq35, whole genome shotgun sequence 1,996
NZ_VUMU01000035.1 Waltera intestinalis strain WCA3-601-WT-6H seq36, whole genome shotgun sequence 1,820
NZ_VUMU01000036.1 Waltera intestinalis strain WCA3-601-WT-6H seq37, whole genome shotgun sequence 1,652
NZ_VUMU01000037.1 Waltera intestinalis strain WCA3-601-WT-6H seq38, whole genome shotgun sequence 1,652
NZ_VUMU01000038.1 Waltera intestinalis strain WCA3-601-WT-6H seq39, whole genome shotgun sequence 1,617
NZ_VUMU01000039.1 Waltera intestinalis strain WCA3-601-WT-6H seq40, whole genome shotgun sequence 1,476
NZ_VUMU01000040.1 Waltera intestinalis strain WCA3-601-WT-6H seq41, whole genome shotgun sequence 1,456
NZ_VUMU01000041.1 Waltera intestinalis strain WCA3-601-WT-6H seq42, whole genome shotgun sequence 1,435
NZ_VUMU01000042.1 Waltera intestinalis strain WCA3-601-WT-6H seq43, whole genome shotgun sequence 1,338
NZ_VUMU01000043.1 Waltera intestinalis strain WCA3-601-WT-6H seq44, whole genome shotgun sequence 1,096
NZ_VUMU01000044.1 Waltera intestinalis strain WCA3-601-WT-6H seq45, whole genome shotgun sequence 1,096
NZ_VUMU01000045.1 Waltera intestinalis strain WCA3-601-WT-6H seq46, whole genome shotgun sequence 1,087
NZ_VUMU01000046.1 Waltera intestinalis strain WCA3-601-WT-6H seq47, whole genome shotgun sequence 1,007

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory