fast.genomicscompare 6,575 genera of bacteria & archaea

 

Oliverpabstia intestinalis BSM-380-WT-5A

Genome identifier: GCF_009696065.1

NCBI assembly name: ASM969606v1

GTDB taxonomy: Bacteria, Bacillota_A, Clostridia, Lachnospirales, Lachnospiraceae, Oliverpabstia, Oliverpabstia intestinalis

NCBI taxonomy: Bacteria, Bacillota, Clostridia, Eubacteriales, Lachnospiraceae, Oliverpabstia, Oliverpabstia intestinalis

Scaffolds: 92

Genes: 3,077 Protein-coding: 2,918 RNAs: 70 pseudogenes: 89

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_VUMS01000001.1 Oliverpabstia intestinalis strain BSM-380-WT-5A seq1, whole genome shotgun sequence 211,528
NZ_VUMS01000002.1 Oliverpabstia intestinalis strain BSM-380-WT-5A seq2, whole genome shotgun sequence 204,611
NZ_VUMS01000003.1 Oliverpabstia intestinalis strain BSM-380-WT-5A seq3, whole genome shotgun sequence 183,112
NZ_VUMS01000004.1 Oliverpabstia intestinalis strain BSM-380-WT-5A seq4, whole genome shotgun sequence 171,596
NZ_VUMS01000005.1 Oliverpabstia intestinalis strain BSM-380-WT-5A seq5, whole genome shotgun sequence 158,108
NZ_VUMS01000006.1 Oliverpabstia intestinalis strain BSM-380-WT-5A seq6, whole genome shotgun sequence 140,097
NZ_VUMS01000007.1 Oliverpabstia intestinalis strain BSM-380-WT-5A seq7, whole genome shotgun sequence 139,771
NZ_VUMS01000008.1 Oliverpabstia intestinalis strain BSM-380-WT-5A seq8, whole genome shotgun sequence 122,493
NZ_VUMS01000009.1 Oliverpabstia intestinalis strain BSM-380-WT-5A seq9, whole genome shotgun sequence 121,792
NZ_VUMS01000010.1 Oliverpabstia intestinalis strain BSM-380-WT-5A seq10, whole genome shotgun sequence 118,859
NZ_VUMS01000011.1 Oliverpabstia intestinalis strain BSM-380-WT-5A seq11, whole genome shotgun sequence 117,136
NZ_VUMS01000012.1 Oliverpabstia intestinalis strain BSM-380-WT-5A seq12, whole genome shotgun sequence 113,838
NZ_VUMS01000013.1 Oliverpabstia intestinalis strain BSM-380-WT-5A seq13, whole genome shotgun sequence 99,804
NZ_VUMS01000014.1 Oliverpabstia intestinalis strain BSM-380-WT-5A seq14, whole genome shotgun sequence 97,558
NZ_VUMS01000015.1 Oliverpabstia intestinalis strain BSM-380-WT-5A seq15, whole genome shotgun sequence 97,344
NZ_VUMS01000016.1 Oliverpabstia intestinalis strain BSM-380-WT-5A seq16, whole genome shotgun sequence 85,758
NZ_VUMS01000017.1 Oliverpabstia intestinalis strain BSM-380-WT-5A seq17, whole genome shotgun sequence 66,997
NZ_VUMS01000018.1 Oliverpabstia intestinalis strain BSM-380-WT-5A seq18, whole genome shotgun sequence 63,169
NZ_VUMS01000019.1 Oliverpabstia intestinalis strain BSM-380-WT-5A seq19, whole genome shotgun sequence 55,319
NZ_VUMS01000020.1 Oliverpabstia intestinalis strain BSM-380-WT-5A seq20, whole genome shotgun sequence 49,354
NZ_VUMS01000021.1 Oliverpabstia intestinalis strain BSM-380-WT-5A seq21, whole genome shotgun sequence 49,290
NZ_VUMS01000022.1 Oliverpabstia intestinalis strain BSM-380-WT-5A seq22, whole genome shotgun sequence 46,211
NZ_VUMS01000023.1 Oliverpabstia intestinalis strain BSM-380-WT-5A seq23, whole genome shotgun sequence 44,130
NZ_VUMS01000024.1 Oliverpabstia intestinalis strain BSM-380-WT-5A seq24, whole genome shotgun sequence 40,730
NZ_VUMS01000025.1 Oliverpabstia intestinalis strain BSM-380-WT-5A seq25, whole genome shotgun sequence 36,666
NZ_VUMS01000026.1 Oliverpabstia intestinalis strain BSM-380-WT-5A seq26, whole genome shotgun sequence 35,403
NZ_VUMS01000027.1 Oliverpabstia intestinalis strain BSM-380-WT-5A seq27, whole genome shotgun sequence 34,304
NZ_VUMS01000028.1 Oliverpabstia intestinalis strain BSM-380-WT-5A seq28, whole genome shotgun sequence 29,216
NZ_VUMS01000029.1 Oliverpabstia intestinalis strain BSM-380-WT-5A seq29, whole genome shotgun sequence 28,321
NZ_VUMS01000030.1 Oliverpabstia intestinalis strain BSM-380-WT-5A seq30, whole genome shotgun sequence 27,405
NZ_VUMS01000031.1 Oliverpabstia intestinalis strain BSM-380-WT-5A seq31, whole genome shotgun sequence 26,750
NZ_VUMS01000032.1 Oliverpabstia intestinalis strain BSM-380-WT-5A seq32, whole genome shotgun sequence 25,845
NZ_VUMS01000033.1 Oliverpabstia intestinalis strain BSM-380-WT-5A seq33, whole genome shotgun sequence 24,979
NZ_VUMS01000034.1 Oliverpabstia intestinalis strain BSM-380-WT-5A seq34, whole genome shotgun sequence 20,276
NZ_VUMS01000035.1 Oliverpabstia intestinalis strain BSM-380-WT-5A seq35, whole genome shotgun sequence 19,481
NZ_VUMS01000036.1 Oliverpabstia intestinalis strain BSM-380-WT-5A seq36, whole genome shotgun sequence 18,877
NZ_VUMS01000037.1 Oliverpabstia intestinalis strain BSM-380-WT-5A seq37, whole genome shotgun sequence 17,164
NZ_VUMS01000038.1 Oliverpabstia intestinalis strain BSM-380-WT-5A seq38, whole genome shotgun sequence 16,634
NZ_VUMS01000039.1 Oliverpabstia intestinalis strain BSM-380-WT-5A seq39, whole genome shotgun sequence 16,230
NZ_VUMS01000040.1 Oliverpabstia intestinalis strain BSM-380-WT-5A seq40, whole genome shotgun sequence 15,414
NZ_VUMS01000041.1 Oliverpabstia intestinalis strain BSM-380-WT-5A seq41, whole genome shotgun sequence 15,111
NZ_VUMS01000042.1 Oliverpabstia intestinalis strain BSM-380-WT-5A seq42, whole genome shotgun sequence 13,691
NZ_VUMS01000043.1 Oliverpabstia intestinalis strain BSM-380-WT-5A seq43, whole genome shotgun sequence 11,337
NZ_VUMS01000044.1 Oliverpabstia intestinalis strain BSM-380-WT-5A seq44, whole genome shotgun sequence 11,016
NZ_VUMS01000045.1 Oliverpabstia intestinalis strain BSM-380-WT-5A seq45, whole genome shotgun sequence 10,863
NZ_VUMS01000046.1 Oliverpabstia intestinalis strain BSM-380-WT-5A seq46, whole genome shotgun sequence 10,260
NZ_VUMS01000047.1 Oliverpabstia intestinalis strain BSM-380-WT-5A seq47, whole genome shotgun sequence 9,564
NZ_VUMS01000048.1 Oliverpabstia intestinalis strain BSM-380-WT-5A seq48, whole genome shotgun sequence 9,263
NZ_VUMS01000049.1 Oliverpabstia intestinalis strain BSM-380-WT-5A seq49, whole genome shotgun sequence 8,080
NZ_VUMS01000050.1 Oliverpabstia intestinalis strain BSM-380-WT-5A seq50, whole genome shotgun sequence 7,897
NZ_VUMS01000051.1 Oliverpabstia intestinalis strain BSM-380-WT-5A seq51, whole genome shotgun sequence 7,325
NZ_VUMS01000052.1 Oliverpabstia intestinalis strain BSM-380-WT-5A seq52, whole genome shotgun sequence 7,082
NZ_VUMS01000053.1 Oliverpabstia intestinalis strain BSM-380-WT-5A seq53, whole genome shotgun sequence 6,950
NZ_VUMS01000054.1 Oliverpabstia intestinalis strain BSM-380-WT-5A seq54, whole genome shotgun sequence 6,766
NZ_VUMS01000055.1 Oliverpabstia intestinalis strain BSM-380-WT-5A seq55, whole genome shotgun sequence 6,373
NZ_VUMS01000056.1 Oliverpabstia intestinalis strain BSM-380-WT-5A seq56, whole genome shotgun sequence 6,344
NZ_VUMS01000057.1 Oliverpabstia intestinalis strain BSM-380-WT-5A seq57, whole genome shotgun sequence 5,891
NZ_VUMS01000058.1 Oliverpabstia intestinalis strain BSM-380-WT-5A seq58, whole genome shotgun sequence 5,657
NZ_VUMS01000059.1 Oliverpabstia intestinalis strain BSM-380-WT-5A seq59, whole genome shotgun sequence 5,586
NZ_VUMS01000060.1 Oliverpabstia intestinalis strain BSM-380-WT-5A seq60, whole genome shotgun sequence 5,233
NZ_VUMS01000061.1 Oliverpabstia intestinalis strain BSM-380-WT-5A seq61, whole genome shotgun sequence 4,415
NZ_VUMS01000062.1 Oliverpabstia intestinalis strain BSM-380-WT-5A seq62, whole genome shotgun sequence 4,080
NZ_VUMS01000063.1 Oliverpabstia intestinalis strain BSM-380-WT-5A seq63, whole genome shotgun sequence 3,971
NZ_VUMS01000064.1 Oliverpabstia intestinalis strain BSM-380-WT-5A seq64, whole genome shotgun sequence 3,962
NZ_VUMS01000065.1 Oliverpabstia intestinalis strain BSM-380-WT-5A seq65, whole genome shotgun sequence 3,849
NZ_VUMS01000066.1 Oliverpabstia intestinalis strain BSM-380-WT-5A seq66, whole genome shotgun sequence 3,306
NZ_VUMS01000067.1 Oliverpabstia intestinalis strain BSM-380-WT-5A seq67, whole genome shotgun sequence 3,187
NZ_VUMS01000068.1 Oliverpabstia intestinalis strain BSM-380-WT-5A seq68, whole genome shotgun sequence 3,084
NZ_VUMS01000069.1 Oliverpabstia intestinalis strain BSM-380-WT-5A seq69, whole genome shotgun sequence 3,017
NZ_VUMS01000070.1 Oliverpabstia intestinalis strain BSM-380-WT-5A seq70, whole genome shotgun sequence 2,781
NZ_VUMS01000071.1 Oliverpabstia intestinalis strain BSM-380-WT-5A seq71, whole genome shotgun sequence 2,642
NZ_VUMS01000072.1 Oliverpabstia intestinalis strain BSM-380-WT-5A seq72, whole genome shotgun sequence 2,543
NZ_VUMS01000073.1 Oliverpabstia intestinalis strain BSM-380-WT-5A seq73, whole genome shotgun sequence 2,478
NZ_VUMS01000074.1 Oliverpabstia intestinalis strain BSM-380-WT-5A seq74, whole genome shotgun sequence 2,118
NZ_VUMS01000075.1 Oliverpabstia intestinalis strain BSM-380-WT-5A seq75, whole genome shotgun sequence 1,948
NZ_VUMS01000076.1 Oliverpabstia intestinalis strain BSM-380-WT-5A seq76, whole genome shotgun sequence 1,902
NZ_VUMS01000077.1 Oliverpabstia intestinalis strain BSM-380-WT-5A seq77, whole genome shotgun sequence 1,835
NZ_VUMS01000078.1 Oliverpabstia intestinalis strain BSM-380-WT-5A seq78, whole genome shotgun sequence 1,825
NZ_VUMS01000079.1 Oliverpabstia intestinalis strain BSM-380-WT-5A seq79, whole genome shotgun sequence 1,770
NZ_VUMS01000080.1 Oliverpabstia intestinalis strain BSM-380-WT-5A seq80, whole genome shotgun sequence 1,748
NZ_VUMS01000081.1 Oliverpabstia intestinalis strain BSM-380-WT-5A seq81, whole genome shotgun sequence 1,545
NZ_VUMS01000082.1 Oliverpabstia intestinalis strain BSM-380-WT-5A seq82, whole genome shotgun sequence 1,461
NZ_VUMS01000083.1 Oliverpabstia intestinalis strain BSM-380-WT-5A seq83, whole genome shotgun sequence 1,363
NZ_VUMS01000084.1 Oliverpabstia intestinalis strain BSM-380-WT-5A seq84, whole genome shotgun sequence 1,363
NZ_VUMS01000085.1 Oliverpabstia intestinalis strain BSM-380-WT-5A seq85, whole genome shotgun sequence 1,326
NZ_VUMS01000086.1 Oliverpabstia intestinalis strain BSM-380-WT-5A seq86, whole genome shotgun sequence 1,310
NZ_VUMS01000087.1 Oliverpabstia intestinalis strain BSM-380-WT-5A seq87, whole genome shotgun sequence 1,221
NZ_VUMS01000088.1 Oliverpabstia intestinalis strain BSM-380-WT-5A seq88, whole genome shotgun sequence 1,184
NZ_VUMS01000089.1 Oliverpabstia intestinalis strain BSM-380-WT-5A seq89, whole genome shotgun sequence 1,154
NZ_VUMS01000090.1 Oliverpabstia intestinalis strain BSM-380-WT-5A seq90, whole genome shotgun sequence 1,111
NZ_VUMS01000091.1 Oliverpabstia intestinalis strain BSM-380-WT-5A seq93, whole genome shotgun sequence 1,021
NZ_VUMS01000092.1 Oliverpabstia intestinalis strain BSM-380-WT-5A seq94, whole genome shotgun sequence 1,011

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory