fast.genomicscompare 6,575 genera of bacteria & archaea

 

Pseudoramibacter porci RF-744-FAT-4

Genome identifier: GCF_009696145.1

NCBI assembly name: ASM969614v1

GTDB taxonomy: Bacteria, Bacillota_A, Clostridia, Eubacteriales, Eubacteriaceae, Pseudoramibacter, Pseudoramibacter porci

NCBI taxonomy: Bacteria, Bacillota, Clostridia, Eubacteriales, Eubacteriaceae, Pseudoramibacter, Pseudoramibacter porci

Scaffolds: 35

Genes: 2,002 Protein-coding: 1,929 RNAs: 62 pseudogenes: 11

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_VUMO01000001.1 Pseudoramibacter porci strain RF-744-FAT-4 seq1, whole genome shotgun sequence 332,055
NZ_VUMO01000002.1 Pseudoramibacter porci strain RF-744-FAT-4 seq2, whole genome shotgun sequence 271,213
NZ_VUMO01000003.1 Pseudoramibacter porci strain RF-744-FAT-4 seq3, whole genome shotgun sequence 192,552
NZ_VUMO01000004.1 Pseudoramibacter porci strain RF-744-FAT-4 seq4, whole genome shotgun sequence 171,895
NZ_VUMO01000005.1 Pseudoramibacter porci strain RF-744-FAT-4 seq5, whole genome shotgun sequence 158,505
NZ_VUMO01000006.1 Pseudoramibacter porci strain RF-744-FAT-4 seq6, whole genome shotgun sequence 138,642
NZ_VUMO01000007.1 Pseudoramibacter porci strain RF-744-FAT-4 seq7, whole genome shotgun sequence 123,113
NZ_VUMO01000008.1 Pseudoramibacter porci strain RF-744-FAT-4 seq8, whole genome shotgun sequence 115,146
NZ_VUMO01000009.1 Pseudoramibacter porci strain RF-744-FAT-4 seq9, whole genome shotgun sequence 101,470
NZ_VUMO01000010.1 Pseudoramibacter porci strain RF-744-FAT-4 seq10, whole genome shotgun sequence 86,654
NZ_VUMO01000011.1 Pseudoramibacter porci strain RF-744-FAT-4 seq11, whole genome shotgun sequence 61,935
NZ_VUMO01000012.1 Pseudoramibacter porci strain RF-744-FAT-4 seq12, whole genome shotgun sequence 61,403
NZ_VUMO01000013.1 Pseudoramibacter porci strain RF-744-FAT-4 seq13, whole genome shotgun sequence 59,394
NZ_VUMO01000014.1 Pseudoramibacter porci strain RF-744-FAT-4 seq14, whole genome shotgun sequence 38,045
NZ_VUMO01000015.1 Pseudoramibacter porci strain RF-744-FAT-4 seq15, whole genome shotgun sequence 36,706
NZ_VUMO01000016.1 Pseudoramibacter porci strain RF-744-FAT-4 seq16, whole genome shotgun sequence 33,453
NZ_VUMO01000017.1 Pseudoramibacter porci strain RF-744-FAT-4 seq17, whole genome shotgun sequence 28,402
NZ_VUMO01000018.1 Pseudoramibacter porci strain RF-744-FAT-4 seq18, whole genome shotgun sequence 19,658
NZ_VUMO01000019.1 Pseudoramibacter porci strain RF-744-FAT-4 seq19, whole genome shotgun sequence 15,288
NZ_VUMO01000020.1 Pseudoramibacter porci strain RF-744-FAT-4 seq20, whole genome shotgun sequence 14,587
NZ_VUMO01000021.1 Pseudoramibacter porci strain RF-744-FAT-4 seq21, whole genome shotgun sequence 12,836
NZ_VUMO01000022.1 Pseudoramibacter porci strain RF-744-FAT-4 seq22, whole genome shotgun sequence 6,973
NZ_VUMO01000023.1 Pseudoramibacter porci strain RF-744-FAT-4 seq23, whole genome shotgun sequence 5,517
NZ_VUMO01000024.1 Pseudoramibacter porci strain RF-744-FAT-4 seq24, whole genome shotgun sequence 2,478
NZ_VUMO01000025.1 Pseudoramibacter porci strain RF-744-FAT-4 seq25, whole genome shotgun sequence 2,063
NZ_VUMO01000026.1 Pseudoramibacter porci strain RF-744-FAT-4 seq26, whole genome shotgun sequence 1,928
NZ_VUMO01000027.1 Pseudoramibacter porci strain RF-744-FAT-4 seq27, whole genome shotgun sequence 1,800
NZ_VUMO01000028.1 Pseudoramibacter porci strain RF-744-FAT-4 seq28, whole genome shotgun sequence 1,660
NZ_VUMO01000029.1 Pseudoramibacter porci strain RF-744-FAT-4 seq29, whole genome shotgun sequence 1,627
NZ_VUMO01000030.1 Pseudoramibacter porci strain RF-744-FAT-4 seq30, whole genome shotgun sequence 1,341
NZ_VUMO01000031.1 Pseudoramibacter porci strain RF-744-FAT-4 seq31, whole genome shotgun sequence 1,245
NZ_VUMO01000032.1 Pseudoramibacter porci strain RF-744-FAT-4 seq32, whole genome shotgun sequence 1,201
NZ_VUMO01000033.1 Pseudoramibacter porci strain RF-744-FAT-4 seq33, whole genome shotgun sequence 1,180
NZ_VUMO01000034.1 Pseudoramibacter porci strain RF-744-FAT-4 seq34, whole genome shotgun sequence 1,176
NZ_VUMO01000035.1 Pseudoramibacter porci strain RF-744-FAT-4 seq35, whole genome shotgun sequence 1,119

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory