fast.genomicscompare 6,575 genera of bacteria & archaea

 

Porcincola intestinalis Oil+RF-744-WCA-WT-11

Genome identifier: GCF_009696445.1

NCBI assembly name: ASM969644v1

GTDB taxonomy: Bacteria, Bacillota_A, Clostridia, Lachnospirales, Lachnospiraceae, Porcincola, Porcincola intestinalis

NCBI taxonomy: Bacteria, Bacillota, Clostridia, Eubacteriales, Lachnospiraceae, Porcincola, Porcincola intestinalis

Scaffolds: 31

Genes: 2,873 Protein-coding: 2,766 RNAs: 56 pseudogenes: 51

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_VULZ01000001.1 Porcincola intestinalis strain Oil+RF-744-WCA-WT-11 seq1, whole genome shotgun sequence 442,740
NZ_VULZ01000002.1 Porcincola intestinalis strain Oil+RF-744-WCA-WT-11 seq2, whole genome shotgun sequence 349,527
NZ_VULZ01000003.1 Porcincola intestinalis strain Oil+RF-744-WCA-WT-11 seq3, whole genome shotgun sequence 295,592
NZ_VULZ01000004.1 Porcincola intestinalis strain Oil+RF-744-WCA-WT-11 seq4, whole genome shotgun sequence 202,782
NZ_VULZ01000005.1 Porcincola intestinalis strain Oil+RF-744-WCA-WT-11 seq5, whole genome shotgun sequence 197,936
NZ_VULZ01000006.1 Porcincola intestinalis strain Oil+RF-744-WCA-WT-11 seq6, whole genome shotgun sequence 187,405
NZ_VULZ01000007.1 Porcincola intestinalis strain Oil+RF-744-WCA-WT-11 seq7, whole genome shotgun sequence 160,593
NZ_VULZ01000008.1 Porcincola intestinalis strain Oil+RF-744-WCA-WT-11 seq8, whole genome shotgun sequence 141,624
NZ_VULZ01000009.1 Porcincola intestinalis strain Oil+RF-744-WCA-WT-11 seq9, whole genome shotgun sequence 133,923
NZ_VULZ01000010.1 Porcincola intestinalis strain Oil+RF-744-WCA-WT-11 seq10, whole genome shotgun sequence 132,957
NZ_VULZ01000011.1 Porcincola intestinalis strain Oil+RF-744-WCA-WT-11 seq11, whole genome shotgun sequence 115,648
NZ_VULZ01000012.1 Porcincola intestinalis strain Oil+RF-744-WCA-WT-11 seq12, whole genome shotgun sequence 109,118
NZ_VULZ01000013.1 Porcincola intestinalis strain Oil+RF-744-WCA-WT-11 seq13, whole genome shotgun sequence 102,936
NZ_VULZ01000014.1 Porcincola intestinalis strain Oil+RF-744-WCA-WT-11 seq14, whole genome shotgun sequence 97,640
NZ_VULZ01000015.1 Porcincola intestinalis strain Oil+RF-744-WCA-WT-11 seq15, whole genome shotgun sequence 90,052
NZ_VULZ01000016.1 Porcincola intestinalis strain Oil+RF-744-WCA-WT-11 seq16, whole genome shotgun sequence 81,604
NZ_VULZ01000017.1 Porcincola intestinalis strain Oil+RF-744-WCA-WT-11 seq17, whole genome shotgun sequence 57,802
NZ_VULZ01000018.1 Porcincola intestinalis strain Oil+RF-744-WCA-WT-11 seq18, whole genome shotgun sequence 51,689
NZ_VULZ01000019.1 Porcincola intestinalis strain Oil+RF-744-WCA-WT-11 seq19, whole genome shotgun sequence 38,942
NZ_VULZ01000020.1 Porcincola intestinalis strain Oil+RF-744-WCA-WT-11 seq20, whole genome shotgun sequence 37,056
NZ_VULZ01000021.1 Porcincola intestinalis strain Oil+RF-744-WCA-WT-11 seq21, whole genome shotgun sequence 28,487
NZ_VULZ01000022.1 Porcincola intestinalis strain Oil+RF-744-WCA-WT-11 seq22, whole genome shotgun sequence 23,721
NZ_VULZ01000023.1 Porcincola intestinalis strain Oil+RF-744-WCA-WT-11 seq23, whole genome shotgun sequence 22,246
NZ_VULZ01000024.1 Porcincola intestinalis strain Oil+RF-744-WCA-WT-11 seq24, whole genome shotgun sequence 17,807
NZ_VULZ01000025.1 Porcincola intestinalis strain Oil+RF-744-WCA-WT-11 seq25, whole genome shotgun sequence 6,943
NZ_VULZ01000026.1 Porcincola intestinalis strain Oil+RF-744-WCA-WT-11 seq26, whole genome shotgun sequence 3,339
NZ_VULZ01000027.1 Porcincola intestinalis strain Oil+RF-744-WCA-WT-11 seq27, whole genome shotgun sequence 2,610
NZ_VULZ01000028.1 Porcincola intestinalis strain Oil+RF-744-WCA-WT-11 seq28, whole genome shotgun sequence 2,595
NZ_VULZ01000029.1 Porcincola intestinalis strain Oil+RF-744-WCA-WT-11 seq29, whole genome shotgun sequence 1,798
NZ_VULZ01000030.1 Porcincola intestinalis strain Oil+RF-744-WCA-WT-11 seq30, whole genome shotgun sequence 1,617
NZ_VULZ01000031.1 Porcincola intestinalis strain Oil+RF-744-WCA-WT-11 seq31, whole genome shotgun sequence 1,249

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory