fast.genomicscompare 6,575 genera of bacteria & archaea

 

Sphingomonas_G profundi LMO-1

Genome identifier: GCF_009739515.1

NCBI assembly name: ASM973951v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Sphingomonadales, Sphingomonadaceae, Sphingomonas_G, Sphingomonas_G profundi

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Sphingomonadales, Sphingomonadaceae, Sphingomonas, Sphingomonas profundi

Scaffolds: 1

Genes: 4,331 Protein-coding: 4,201 RNAs: 56 pseudogenes: 74

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_CP046535.1 Sphingomonas profundi strain LMO-1 chromosome, complete genome 4,538,634

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory