fast.genomicscompare 6,575 genera of bacteria & archaea

 

Nitratireductor_D arenosus CAU 1489

Genome identifier: GCF_009742725.1

NCBI assembly name: ASM974272v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhizobiales, Rhizobiaceae, Nitratireductor_D, Nitratireductor_D arenosus

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Hyphomicrobiales, Phyllobacteriaceae, Nitratireductor, Nitratireductor arenosus

Scaffolds: 15

Genes: 4,711 Protein-coding: 4,513 RNAs: 56 pseudogenes: 142

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_WPHG01000001.1 Nitratireductor arenosus strain CAU 1489 contig1, whole genome shotgun sequence 1,441,691
NZ_WPHG01000002.1 Nitratireductor arenosus strain CAU 1489 contig2, whole genome shotgun sequence 1,016,918
NZ_WPHG01000003.1 Nitratireductor arenosus strain CAU 1489 contig3, whole genome shotgun sequence 918,900
NZ_WPHG01000004.1 Nitratireductor arenosus strain CAU 1489 contig4, whole genome shotgun sequence 481,370
NZ_WPHG01000005.1 Nitratireductor arenosus strain CAU 1489 contig5, whole genome shotgun sequence 190,227
NZ_WPHG01000006.1 Nitratireductor arenosus strain CAU 1489 contig6, whole genome shotgun sequence 178,440
NZ_WPHG01000007.1 Nitratireductor arenosus strain CAU 1489 contig7, whole genome shotgun sequence 174,898
NZ_WPHG01000008.1 Nitratireductor arenosus strain CAU 1489 contig8, whole genome shotgun sequence 160,795
NZ_WPHG01000009.1 Nitratireductor arenosus strain CAU 1489 contig9, whole genome shotgun sequence 99,688
NZ_WPHG01000010.1 Nitratireductor arenosus strain CAU 1489 contig10, whole genome shotgun sequence 55,892
NZ_WPHG01000011.1 Nitratireductor arenosus strain CAU 1489 contig11, whole genome shotgun sequence 42,417
NZ_WPHG01000012.1 Nitratireductor arenosus strain CAU 1489 contig12, whole genome shotgun sequence 37,519
NZ_WPHG01000013.1 Nitratireductor arenosus strain CAU 1489 contig13, whole genome shotgun sequence 3,627
NZ_WPHG01000014.1 Nitratireductor arenosus strain CAU 1489 contig14, whole genome shotgun sequence 2,891
NZ_WPHG01000015.1 Nitratireductor arenosus strain CAU 1489 contig15, whole genome shotgun sequence 1,295

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory