fast.genomicscompare 6,575 genera of bacteria & archaea

 

Caproicibacter fermentans EA1

Genome identifier: GCF_009746625.1

NCBI assembly name: ASM974662v1

GTDB taxonomy: Bacteria, Bacillota_A, Clostridia, Oscillospirales, Acutalibacteraceae, Caproicibacter, Caproicibacter fermentans

NCBI taxonomy: Bacteria, Bacillota, Clostridia, Eubacteriales, Oscillospiraceae, Caproicibacter, Caproicibacter fermentans

Scaffolds: 113

Genes: 3,959 Protein-coding: 3,811 RNAs: 64 pseudogenes: 84

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_VWXL01000001.1 Caproicibacter fermentans strain EA1 CAFE_1, whole genome shotgun sequence 2,380
NZ_VWXL01000002.1 Caproicibacter fermentans strain EA1 CAFE_2, whole genome shotgun sequence 51,113
NZ_VWXL01000003.1 Caproicibacter fermentans strain EA1 CAFE_3, whole genome shotgun sequence 105,285
NZ_VWXL01000004.1 Caproicibacter fermentans strain EA1 CAFE_4, whole genome shotgun sequence 8,334
NZ_VWXL01000005.1 Caproicibacter fermentans strain EA1 CAFE_5, whole genome shotgun sequence 503
NZ_VWXL01000006.1 Caproicibacter fermentans strain EA1 CAFE_6, whole genome shotgun sequence 870
NZ_VWXL01000007.1 Caproicibacter fermentans strain EA1 CAFE_7, whole genome shotgun sequence 7,996
NZ_VWXL01000008.1 Caproicibacter fermentans strain EA1 CAFE_8, whole genome shotgun sequence 54,173
NZ_VWXL01000009.1 Caproicibacter fermentans strain EA1 CAFE_9, whole genome shotgun sequence 959
NZ_VWXL01000010.1 Caproicibacter fermentans strain EA1 CAFE_10, whole genome shotgun sequence 72,289
NZ_VWXL01000011.1 Caproicibacter fermentans strain EA1 CAFE_11, whole genome shotgun sequence 40,925
NZ_VWXL01000012.1 Caproicibacter fermentans strain EA1 CAFE_12, whole genome shotgun sequence 15,970
NZ_VWXL01000013.1 Caproicibacter fermentans strain EA1 CAFE_13, whole genome shotgun sequence 2,726
NZ_VWXL01000014.1 Caproicibacter fermentans strain EA1 CAFE_14, whole genome shotgun sequence 379,673
NZ_VWXL01000015.1 Caproicibacter fermentans strain EA1 CAFE_15, whole genome shotgun sequence 1,620
NZ_VWXL01000016.1 Caproicibacter fermentans strain EA1 CAFE_16, whole genome shotgun sequence 931
NZ_VWXL01000017.1 Caproicibacter fermentans strain EA1 CAFE_17, whole genome shotgun sequence 833
NZ_VWXL01000018.1 Caproicibacter fermentans strain EA1 CAFE_18, whole genome shotgun sequence 18,606
NZ_VWXL01000019.1 Caproicibacter fermentans strain EA1 CAFE_19, whole genome shotgun sequence 84,200
NZ_VWXL01000020.1 Caproicibacter fermentans strain EA1 CAFE_20, whole genome shotgun sequence 78,374
NZ_VWXL01000021.1 Caproicibacter fermentans strain EA1 CAFE_21, whole genome shotgun sequence 19,281
NZ_VWXL01000022.1 Caproicibacter fermentans strain EA1 CAFE_22, whole genome shotgun sequence 1,544
NZ_VWXL01000023.1 Caproicibacter fermentans strain EA1 CAFE_23, whole genome shotgun sequence 8,228
NZ_VWXL01000024.1 Caproicibacter fermentans strain EA1 CAFE_24, whole genome shotgun sequence 54,364
NZ_VWXL01000025.1 Caproicibacter fermentans strain EA1 CAFE_25, whole genome shotgun sequence 22,674
NZ_VWXL01000026.1 Caproicibacter fermentans strain EA1 CAFE_26, whole genome shotgun sequence 44,211
NZ_VWXL01000027.1 Caproicibacter fermentans strain EA1 CAFE_27, whole genome shotgun sequence 83,528
NZ_VWXL01000028.1 Caproicibacter fermentans strain EA1 CAFE_28, whole genome shotgun sequence 2,161
NZ_VWXL01000029.1 Caproicibacter fermentans strain EA1 CAFE_29, whole genome shotgun sequence 26,298
NZ_VWXL01000030.1 Caproicibacter fermentans strain EA1 CAFE_30, whole genome shotgun sequence 2,377
NZ_VWXL01000031.1 Caproicibacter fermentans strain EA1 CAFE_31, whole genome shotgun sequence 1,555
NZ_VWXL01000032.1 Caproicibacter fermentans strain EA1 CAFE_32, whole genome shotgun sequence 1,543
NZ_VWXL01000033.1 Caproicibacter fermentans strain EA1 CAFE_33, whole genome shotgun sequence 8,130
NZ_VWXL01000034.1 Caproicibacter fermentans strain EA1 CAFE_34, whole genome shotgun sequence 2,350
NZ_VWXL01000035.1 Caproicibacter fermentans strain EA1 CAFE_35, whole genome shotgun sequence 33,921
NZ_VWXL01000036.1 Caproicibacter fermentans strain EA1 CAFE_36, whole genome shotgun sequence 29,291
NZ_VWXL01000037.1 Caproicibacter fermentans strain EA1 CAFE_37, whole genome shotgun sequence 4,353
NZ_VWXL01000038.1 Caproicibacter fermentans strain EA1 CAFE_38, whole genome shotgun sequence 1,202
NZ_VWXL01000039.1 Caproicibacter fermentans strain EA1 CAFE_39, whole genome shotgun sequence 1,513
NZ_VWXL01000040.1 Caproicibacter fermentans strain EA1 CAFE_40, whole genome shotgun sequence 814
NZ_VWXL01000041.1 Caproicibacter fermentans strain EA1 CAFE_41, whole genome shotgun sequence 17,400
NZ_VWXL01000042.1 Caproicibacter fermentans strain EA1 CAFE_42, whole genome shotgun sequence 1,190
NZ_VWXL01000043.1 Caproicibacter fermentans strain EA1 CAFE_43, whole genome shotgun sequence 3,306
NZ_VWXL01000044.1 Caproicibacter fermentans strain EA1 CAFE_44, whole genome shotgun sequence 2,859
NZ_VWXL01000045.1 Caproicibacter fermentans strain EA1 CAFE_45, whole genome shotgun sequence 11,078
NZ_VWXL01000046.1 Caproicibacter fermentans strain EA1 CAFE_46, whole genome shotgun sequence 79,166
NZ_VWXL01000047.1 Caproicibacter fermentans strain EA1 CAFE_47, whole genome shotgun sequence 184,065
NZ_VWXL01000048.1 Caproicibacter fermentans strain EA1 CAFE_48, whole genome shotgun sequence 15,321
NZ_VWXL01000049.1 Caproicibacter fermentans strain EA1 CAFE_49, whole genome shotgun sequence 588
NZ_VWXL01000050.1 Caproicibacter fermentans strain EA1 CAFE_50, whole genome shotgun sequence 3,743
NZ_VWXL01000051.1 Caproicibacter fermentans strain EA1 CAFE_51, whole genome shotgun sequence 649
NZ_VWXL01000052.1 Caproicibacter fermentans strain EA1 CAFE_52, whole genome shotgun sequence 322,673
NZ_VWXL01000053.1 Caproicibacter fermentans strain EA1 CAFE_53, whole genome shotgun sequence 176,071
NZ_VWXL01000054.1 Caproicibacter fermentans strain EA1 CAFE_54, whole genome shotgun sequence 1,478
NZ_VWXL01000055.1 Caproicibacter fermentans strain EA1 CAFE_55, whole genome shotgun sequence 17,368
NZ_VWXL01000056.1 Caproicibacter fermentans strain EA1 CAFE_56, whole genome shotgun sequence 1,724
NZ_VWXL01000057.1 Caproicibacter fermentans strain EA1 CAFE_57, whole genome shotgun sequence 8,171
NZ_VWXL01000058.1 Caproicibacter fermentans strain EA1 CAFE_58, whole genome shotgun sequence 175,618
NZ_VWXL01000059.1 Caproicibacter fermentans strain EA1 CAFE_59, whole genome shotgun sequence 2,912
NZ_VWXL01000060.1 Caproicibacter fermentans strain EA1 CAFE_60, whole genome shotgun sequence 9,572
NZ_VWXL01000061.1 Caproicibacter fermentans strain EA1 CAFE_61, whole genome shotgun sequence 37,176
NZ_VWXL01000062.1 Caproicibacter fermentans strain EA1 CAFE_62, whole genome shotgun sequence 741
NZ_VWXL01000063.1 Caproicibacter fermentans strain EA1 CAFE_63, whole genome shotgun sequence 7,693
NZ_VWXL01000064.1 Caproicibacter fermentans strain EA1 CAFE_64, whole genome shotgun sequence 714
NZ_VWXL01000065.1 Caproicibacter fermentans strain EA1 CAFE_65, whole genome shotgun sequence 1,236
NZ_VWXL01000066.1 Caproicibacter fermentans strain EA1 CAFE_66, whole genome shotgun sequence 526
NZ_VWXL01000067.1 Caproicibacter fermentans strain EA1 CAFE_67, whole genome shotgun sequence 7,285
NZ_VWXL01000068.1 Caproicibacter fermentans strain EA1 CAFE_68, whole genome shotgun sequence 20,576
NZ_VWXL01000069.1 Caproicibacter fermentans strain EA1 CAFE_69, whole genome shotgun sequence 79,074
NZ_VWXL01000070.1 Caproicibacter fermentans strain EA1 CAFE_70, whole genome shotgun sequence 2,759
NZ_VWXL01000071.1 Caproicibacter fermentans strain EA1 CAFE_71, whole genome shotgun sequence 22,194
NZ_VWXL01000072.1 Caproicibacter fermentans strain EA1 CAFE_72, whole genome shotgun sequence 1,619
NZ_VWXL01000073.1 Caproicibacter fermentans strain EA1 CAFE_73, whole genome shotgun sequence 20,958
NZ_VWXL01000074.1 Caproicibacter fermentans strain EA1 CAFE_74, whole genome shotgun sequence 31,683
NZ_VWXL01000075.1 Caproicibacter fermentans strain EA1 CAFE_75, whole genome shotgun sequence 29,089
NZ_VWXL01000076.1 Caproicibacter fermentans strain EA1 CAFE_76, whole genome shotgun sequence 1,223
NZ_VWXL01000077.1 Caproicibacter fermentans strain EA1 CAFE_77, whole genome shotgun sequence 153,776
NZ_VWXL01000078.1 Caproicibacter fermentans strain EA1 CAFE_78, whole genome shotgun sequence 12,577
NZ_VWXL01000079.1 Caproicibacter fermentans strain EA1 CAFE_79, whole genome shotgun sequence 786
NZ_VWXL01000080.1 Caproicibacter fermentans strain EA1 CAFE_80, whole genome shotgun sequence 19,852
NZ_VWXL01000081.1 Caproicibacter fermentans strain EA1 CAFE_81, whole genome shotgun sequence 49,271
NZ_VWXL01000082.1 Caproicibacter fermentans strain EA1 CAFE_82, whole genome shotgun sequence 6,077
NZ_VWXL01000083.1 Caproicibacter fermentans strain EA1 CAFE_83, whole genome shotgun sequence 20,369
NZ_VWXL01000084.1 Caproicibacter fermentans strain EA1 CAFE_84, whole genome shotgun sequence 169,375
NZ_VWXL01000085.1 Caproicibacter fermentans strain EA1 CAFE_85, whole genome shotgun sequence 41,585
NZ_VWXL01000086.1 Caproicibacter fermentans strain EA1 CAFE_86, whole genome shotgun sequence 7,855
NZ_VWXL01000087.1 Caproicibacter fermentans strain EA1 CAFE_87, whole genome shotgun sequence 16,789
NZ_VWXL01000088.1 Caproicibacter fermentans strain EA1 CAFE_88, whole genome shotgun sequence 19,160
NZ_VWXL01000089.1 Caproicibacter fermentans strain EA1 CAFE_89, whole genome shotgun sequence 43,252
NZ_VWXL01000090.1 Caproicibacter fermentans strain EA1 CAFE_90, whole genome shotgun sequence 1,727
NZ_VWXL01000091.1 Caproicibacter fermentans strain EA1 CAFE_91, whole genome shotgun sequence 911
NZ_VWXL01000092.1 Caproicibacter fermentans strain EA1 CAFE_92, whole genome shotgun sequence 1,188
NZ_VWXL01000093.1 Caproicibacter fermentans strain EA1 CAFE_93, whole genome shotgun sequence 1,865
NZ_VWXL01000094.1 Caproicibacter fermentans strain EA1 CAFE_94, whole genome shotgun sequence 778
NZ_VWXL01000095.1 Caproicibacter fermentans strain EA1 CAFE_95, whole genome shotgun sequence 112,991
NZ_VWXL01000096.1 Caproicibacter fermentans strain EA1 CAFE_96, whole genome shotgun sequence 13,469
NZ_VWXL01000097.1 Caproicibacter fermentans strain EA1 CAFE_97, whole genome shotgun sequence 6,345
NZ_VWXL01000098.1 Caproicibacter fermentans strain EA1 CAFE_98, whole genome shotgun sequence 3,767
NZ_VWXL01000099.1 Caproicibacter fermentans strain EA1 CAFE_99, whole genome shotgun sequence 7,791
NZ_VWXL01000100.1 Caproicibacter fermentans strain EA1 CAFE_100, whole genome shotgun sequence 200,708
NZ_VWXL01000101.1 Caproicibacter fermentans strain EA1 CAFE_101, whole genome shotgun sequence 2,168
NZ_VWXL01000102.1 Caproicibacter fermentans strain EA1 CAFE_102, whole genome shotgun sequence 16,613
NZ_VWXL01000103.1 Caproicibacter fermentans strain EA1 CAFE_103, whole genome shotgun sequence 51,741
NZ_VWXL01000104.1 Caproicibacter fermentans strain EA1 CAFE_104, whole genome shotgun sequence 12,675
NZ_VWXL01000105.1 Caproicibacter fermentans strain EA1 CAFE_105, whole genome shotgun sequence 11,161
NZ_VWXL01000106.1 Caproicibacter fermentans strain EA1 CAFE_106, whole genome shotgun sequence 115,321
NZ_VWXL01000107.1 Caproicibacter fermentans strain EA1 CAFE_107, whole genome shotgun sequence 556
NZ_VWXL01000108.1 Caproicibacter fermentans strain EA1 CAFE_108, whole genome shotgun sequence 103,098
NZ_VWXL01000109.1 Caproicibacter fermentans strain EA1 CAFE_109, whole genome shotgun sequence 20,576
NZ_VWXL01000110.1 Caproicibacter fermentans strain EA1 CAFE_110, whole genome shotgun sequence 55,341
NZ_VWXL01000111.1 Caproicibacter fermentans strain EA1 CAFE_111, whole genome shotgun sequence 14,659
NZ_VWXL01000112.1 Caproicibacter fermentans strain EA1 CAFE_112, whole genome shotgun sequence 582
NZ_VWXL01000113.1 Caproicibacter fermentans strain EA1 CAFE_113, whole genome shotgun sequence 2,315

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory