fast.genomicscompare 6,575 genera of bacteria & archaea

 

Defluviitalea_A raffinosedens 249c-K6

Genome identifier: GCF_009765695.1

NCBI assembly name: ASM976569v1

GTDB taxonomy: Bacteria, Bacillota_A, Clostridia, Lachnospirales, Defluviitaleaceae, Defluviitalea_A, Defluviitalea_A raffinosedens

NCBI taxonomy: Bacteria, Bacillota, Clostridia, Eubacteriales, Defluviitaleaceae, Defluviitalea, Defluviitalea raffinosedens

Scaffolds: 31

Genes: 2,982 Protein-coding: 2,866 RNAs: 86 pseudogenes: 30

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_WSLF01000001.1 Defluviitalea raffinosedens strain 249c-K6 seq1, whole genome shotgun sequence 524,752
NZ_WSLF01000002.1 Defluviitalea raffinosedens strain 249c-K6 seq2, whole genome shotgun sequence 393,626
NZ_WSLF01000003.1 Defluviitalea raffinosedens strain 249c-K6 seq3, whole genome shotgun sequence 319,992
NZ_WSLF01000004.1 Defluviitalea raffinosedens strain 249c-K6 seq4, whole genome shotgun sequence 223,730
NZ_WSLF01000005.1 Defluviitalea raffinosedens strain 249c-K6 seq5, whole genome shotgun sequence 191,409
NZ_WSLF01000006.1 Defluviitalea raffinosedens strain 249c-K6 seq6, whole genome shotgun sequence 153,585
NZ_WSLF01000007.1 Defluviitalea raffinosedens strain 249c-K6 seq7, whole genome shotgun sequence 142,352
NZ_WSLF01000008.1 Defluviitalea raffinosedens strain 249c-K6 seq8, whole genome shotgun sequence 126,692
NZ_WSLF01000009.1 Defluviitalea raffinosedens strain 249c-K6 seq9, whole genome shotgun sequence 112,757
NZ_WSLF01000010.1 Defluviitalea raffinosedens strain 249c-K6 seq10, whole genome shotgun sequence 98,955
NZ_WSLF01000011.1 Defluviitalea raffinosedens strain 249c-K6 seq11, whole genome shotgun sequence 90,205
NZ_WSLF01000012.1 Defluviitalea raffinosedens strain 249c-K6 seq12, whole genome shotgun sequence 89,100
NZ_WSLF01000013.1 Defluviitalea raffinosedens strain 249c-K6 seq13, whole genome shotgun sequence 73,380
NZ_WSLF01000014.1 Defluviitalea raffinosedens strain 249c-K6 seq14, whole genome shotgun sequence 69,943
NZ_WSLF01000015.1 Defluviitalea raffinosedens strain 249c-K6 seq15, whole genome shotgun sequence 66,269
NZ_WSLF01000016.1 Defluviitalea raffinosedens strain 249c-K6 seq16, whole genome shotgun sequence 65,568
NZ_WSLF01000017.1 Defluviitalea raffinosedens strain 249c-K6 seq17, whole genome shotgun sequence 58,287
NZ_WSLF01000018.1 Defluviitalea raffinosedens strain 249c-K6 seq18, whole genome shotgun sequence 54,121
NZ_WSLF01000019.1 Defluviitalea raffinosedens strain 249c-K6 seq19, whole genome shotgun sequence 49,402
NZ_WSLF01000020.1 Defluviitalea raffinosedens strain 249c-K6 seq20, whole genome shotgun sequence 47,133
NZ_WSLF01000021.1 Defluviitalea raffinosedens strain 249c-K6 seq21, whole genome shotgun sequence 30,958
NZ_WSLF01000022.1 Defluviitalea raffinosedens strain 249c-K6 seq22, whole genome shotgun sequence 28,588
NZ_WSLF01000023.1 Defluviitalea raffinosedens strain 249c-K6 seq23, whole genome shotgun sequence 26,813
NZ_WSLF01000024.1 Defluviitalea raffinosedens strain 249c-K6 seq24, whole genome shotgun sequence 21,697
NZ_WSLF01000025.1 Defluviitalea raffinosedens strain 249c-K6 seq25, whole genome shotgun sequence 19,140
NZ_WSLF01000026.1 Defluviitalea raffinosedens strain 249c-K6 seq26, whole genome shotgun sequence 6,711
NZ_WSLF01000027.1 Defluviitalea raffinosedens strain 249c-K6 seq27, whole genome shotgun sequence 1,556
NZ_WSLF01000028.1 Defluviitalea raffinosedens strain 249c-K6 seq28, whole genome shotgun sequence 1,522
NZ_WSLF01000029.1 Defluviitalea raffinosedens strain 249c-K6 seq29, whole genome shotgun sequence 1,459
NZ_WSLF01000030.1 Defluviitalea raffinosedens strain 249c-K6 seq30, whole genome shotgun sequence 1,294
NZ_WSLF01000031.1 Defluviitalea raffinosedens strain 249c-K6 seq31, whole genome shotgun sequence 1,146

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory