fast.genomicscompare 6,575 genera of bacteria & archaea

 

CAHJWH01 sp009765965 S45

Genome identifier: GCF_009765965.1

NCBI assembly name: ASM976596v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Caulobacterales, Caulobacteraceae, CAHJWH01, CAHJWH01 sp009765965

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Caulobacterales, Caulobacteraceae, Caulobacter

Scaffolds: 19

Genes: 4,476 Protein-coding: 4,348 RNAs: 51 pseudogenes: 77

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_LMUL01000001.1 Caulobacter sp. S45 NODE_42_length_236207_cov_10.659108, whole genome shotgun sequence 236,293
NZ_LMUL01000002.1 Caulobacter sp. S45 NODE_5_length_88470_cov_9.889601, whole genome shotgun sequence 88,556
NZ_LMUL01000003.1 Caulobacter sp. S45 NODE_7_length_219806_cov_10.862961, whole genome shotgun sequence 219,892
NZ_LMUL01000004.1 Caulobacter sp. S45 NODE_8_length_95667_cov_10.696227, whole genome shotgun sequence 95,753
NZ_LMUL01000005.1 Caulobacter sp. S45 NODE_9_length_163778_cov_10.574553, whole genome shotgun sequence 163,864
NZ_LMUL01000006.1 Caulobacter sp. S45 NODE_10_length_549_cov_8.637523, whole genome shotgun sequence 635
NZ_LMUL01000007.1 Caulobacter sp. S45 NODE_12_length_137156_cov_10.623560, whole genome shotgun sequence 137,242
NZ_LMUL01000008.1 Caulobacter sp. S45 NODE_14_length_21806_cov_10.301568, whole genome shotgun sequence 21,892
NZ_LMUL01000009.1 Caulobacter sp. S45 NODE_15_length_2188_cov_9.103747, whole genome shotgun sequence 2,274
NZ_LMUL01000010.1 Caulobacter sp. S45 NODE_17_length_404507_cov_10.844146, whole genome shotgun sequence 404,593
NZ_LMUL01000011.1 Caulobacter sp. S45 NODE_20_length_146911_cov_10.372259, whole genome shotgun sequence 146,997
NZ_LMUL01000012.1 Caulobacter sp. S45 NODE_21_length_229_cov_10.000000, whole genome shotgun sequence 315
NZ_LMUL01000013.1 Caulobacter sp. S45 NODE_22_length_65464_cov_10.220762, whole genome shotgun sequence 65,550
NZ_LMUL01000014.1 Caulobacter sp. S45 NODE_26_length_2759343_cov_10.714966, whole genome shotgun sequence 2,759,429
NZ_LMUL01000015.1 Caulobacter sp. S45 NODE_27_length_5460_cov_10.671978, whole genome shotgun sequence 5,546
NZ_LMUL01000016.1 Caulobacter sp. S45 NODE_30_length_4616_cov_10.420278, whole genome shotgun sequence 4,702
NZ_LMUL01000017.1 Caulobacter sp. S45 NODE_33_length_452018_cov_10.632968, whole genome shotgun sequence 452,104
NZ_LMUL01000018.1 Caulobacter sp. S45 NODE_36_length_16936_cov_10.576287, whole genome shotgun sequence 17,022
NZ_LMUL01000019.1 Caulobacter sp. S45 NODE_38_length_68777_cov_10.440147, whole genome shotgun sequence 68,863

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory