fast.genomicscompare 6,575 genera of bacteria & archaea

 

Halomarina oriensis JCM 16495

Genome identifier: GCF_009791395.1

NCBI assembly name: ASM979139v1

GTDB taxonomy: Archaea, Halobacteriota, Halobacteria, Halobacteriales, Haloarculaceae, Halomarina, Halomarina oriensis

NCBI taxonomy: Archaea, Euryarchaeota, Halobacteria, Halobacteriales, Haloarculaceae, Halomarina, Halomarina oriensis

Scaffolds: 50

Genes: 4,322 Protein-coding: 4,053 RNAs: 52 pseudogenes: 217

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_WSZK01000001.1 Halomarina oriensis strain JCM 16495 H_oriensis_contig_1, whole genome shotgun sequence 176,235
NZ_WSZK01000002.1 Halomarina oriensis strain JCM 16495 H_oriensis_contig_2, whole genome shotgun sequence 36,497
NZ_WSZK01000003.1 Halomarina oriensis strain JCM 16495 H_oriensis_contig_3, whole genome shotgun sequence 8,279
NZ_WSZK01000004.1 Halomarina oriensis strain JCM 16495 H_oriensis_contig_4, whole genome shotgun sequence 34,567
NZ_WSZK01000005.1 Halomarina oriensis strain JCM 16495 H_oriensis_contig_5, whole genome shotgun sequence 84,824
NZ_WSZK01000006.1 Halomarina oriensis strain JCM 16495 H_oriensis_contig_6, whole genome shotgun sequence 160,159
NZ_WSZK01000007.1 Halomarina oriensis strain JCM 16495 H_oriensis_contig_7, whole genome shotgun sequence 142,465
NZ_WSZK01000008.1 Halomarina oriensis strain JCM 16495 H_oriensis_contig_8, whole genome shotgun sequence 121,809
NZ_WSZK01000009.1 Halomarina oriensis strain JCM 16495 H_oriensis_contig_9, whole genome shotgun sequence 76,776
NZ_WSZK01000010.1 Halomarina oriensis strain JCM 16495 H_oriensis_contig_10, whole genome shotgun sequence 87,418
NZ_WSZK01000011.1 Halomarina oriensis strain JCM 16495 H_oriensis_contig_11, whole genome shotgun sequence 83,695
NZ_WSZK01000012.1 Halomarina oriensis strain JCM 16495 H_oriensis_contig_12, whole genome shotgun sequence 151,568
NZ_WSZK01000013.1 Halomarina oriensis strain JCM 16495 H_oriensis_contig_13, whole genome shotgun sequence 18,873
NZ_WSZK01000014.1 Halomarina oriensis strain JCM 16495 H_oriensis_contig_14, whole genome shotgun sequence 101,877
NZ_WSZK01000015.1 Halomarina oriensis strain JCM 16495 H_oriensis_contig_15, whole genome shotgun sequence 838,343
NZ_WSZK01000016.1 Halomarina oriensis strain JCM 16495 H_oriensis_contig_16, whole genome shotgun sequence 51,679
NZ_WSZK01000017.1 Halomarina oriensis strain JCM 16495 H_oriensis_contig_17, whole genome shotgun sequence 129,742
NZ_WSZK01000018.1 Halomarina oriensis strain JCM 16495 H_oriensis_contig_18, whole genome shotgun sequence 90,036
NZ_WSZK01000019.1 Halomarina oriensis strain JCM 16495 H_oriensis_contig_19, whole genome shotgun sequence 29,189
NZ_WSZK01000020.1 Halomarina oriensis strain JCM 16495 H_oriensis_contig_20, whole genome shotgun sequence 17,969
NZ_WSZK01000021.1 Halomarina oriensis strain JCM 16495 H_oriensis_contig_21, whole genome shotgun sequence 53,760
NZ_WSZK01000022.1 Halomarina oriensis strain JCM 16495 H_oriensis_contig_22, whole genome shotgun sequence 45,499
NZ_WSZK01000023.1 Halomarina oriensis strain JCM 16495 H_oriensis_contig_23, whole genome shotgun sequence 194,898
NZ_WSZK01000024.1 Halomarina oriensis strain JCM 16495 H_oriensis_contig_24, whole genome shotgun sequence 56,935
NZ_WSZK01000025.1 Halomarina oriensis strain JCM 16495 H_oriensis_contig_25, whole genome shotgun sequence 56,130
NZ_WSZK01000026.1 Halomarina oriensis strain JCM 16495 H_oriensis_contig_26, whole genome shotgun sequence 88,491
NZ_WSZK01000027.1 Halomarina oriensis strain JCM 16495 H_oriensis_contig_27, whole genome shotgun sequence 45,733
NZ_WSZK01000028.1 Halomarina oriensis strain JCM 16495 H_oriensis_contig_28, whole genome shotgun sequence 70,648
NZ_WSZK01000029.1 Halomarina oriensis strain JCM 16495 H_oriensis_contig_29, whole genome shotgun sequence 45,035
NZ_WSZK01000030.1 Halomarina oriensis strain JCM 16495 H_oriensis_contig_30, whole genome shotgun sequence 187,191
NZ_WSZK01000031.1 Halomarina oriensis strain JCM 16495 H_oriensis_contig_31, whole genome shotgun sequence 10,855
NZ_WSZK01000032.1 Halomarina oriensis strain JCM 16495 H_oriensis_contig_32, whole genome shotgun sequence 3,538
NZ_WSZK01000033.1 Halomarina oriensis strain JCM 16495 H_oriensis_contig_33, whole genome shotgun sequence 40,673
NZ_WSZK01000034.1 Halomarina oriensis strain JCM 16495 H_oriensis_contig_34, whole genome shotgun sequence 167,050
NZ_WSZK01000035.1 Halomarina oriensis strain JCM 16495 H_oriensis_contig_35, whole genome shotgun sequence 57,198
NZ_WSZK01000036.1 Halomarina oriensis strain JCM 16495 H_oriensis_contig_36, whole genome shotgun sequence 98,311
NZ_WSZK01000037.1 Halomarina oriensis strain JCM 16495 H_oriensis_contig_37, whole genome shotgun sequence 29,138
NZ_WSZK01000038.1 Halomarina oriensis strain JCM 16495 H_oriensis_contig_38, whole genome shotgun sequence 92,143
NZ_WSZK01000039.1 Halomarina oriensis strain JCM 16495 H_oriensis_contig_39, whole genome shotgun sequence 79,665
NZ_WSZK01000040.1 Halomarina oriensis strain JCM 16495 H_oriensis_contig_40, whole genome shotgun sequence 13,280
NZ_WSZK01000041.1 Halomarina oriensis strain JCM 16495 H_oriensis_contig_41, whole genome shotgun sequence 33,784
NZ_WSZK01000042.1 Halomarina oriensis strain JCM 16495 H_oriensis_contig_42, whole genome shotgun sequence 53,403
NZ_WSZK01000043.1 Halomarina oriensis strain JCM 16495 H_oriensis_contig_43, whole genome shotgun sequence 11,847
NZ_WSZK01000044.1 Halomarina oriensis strain JCM 16495 H_oriensis_contig_44, whole genome shotgun sequence 27,180
NZ_WSZK01000045.1 Halomarina oriensis strain JCM 16495 H_oriensis_contig_45, whole genome shotgun sequence 3,449
NZ_WSZK01000046.1 Halomarina oriensis strain JCM 16495 H_oriensis_contig_46, whole genome shotgun sequence 27,547
NZ_WSZK01000047.1 Halomarina oriensis strain JCM 16495 H_oriensis_contig_47, whole genome shotgun sequence 11,562
NZ_WSZK01000048.1 Halomarina oriensis strain JCM 16495 H_oriensis_contig_48, whole genome shotgun sequence 11,022
NZ_WSZK01000049.1 Halomarina oriensis strain JCM 16495 H_oriensis_contig_49, whole genome shotgun sequence 9,981
NZ_WSZK01000050.1 Halomarina oriensis strain JCM 16495 H_oriensis_contig_50, whole genome shotgun sequence 1,761

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory