fast.genomicscompare 6,575 genera of bacteria & archaea

 

Pontixanthobacter luteolus SW-109

Genome identifier: GCF_009828095.1

NCBI assembly name: ASM982809v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Sphingomonadales, Sphingomonadaceae, Pontixanthobacter, Pontixanthobacter luteolus

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Sphingomonadales, Erythrobacteraceae, Pontixanthobacter, Pontixanthobacter luteolus

Scaffolds: 3

Genes: 2,785 Protein-coding: 2,712 RNAs: 67 pseudogenes: 6

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_WTYP01000001.1 Pontixanthobacter luteolus strain SW-109 NODE_1_length_1758890, whole genome shotgun sequence 1,758,890
NZ_WTYP01000002.1 Pontixanthobacter luteolus strain SW-109 NODE_2_length_1127375, whole genome shotgun sequence 1,127,375
NZ_WTYP01000003.1 Pontixanthobacter luteolus strain SW-109 NODE_3_length_1348, whole genome shotgun sequence 1,348

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory