fast.genomicscompare 6,575 genera of bacteria & archaea

 

Altericroceibacterium indicum DSM 18604

Genome identifier: GCF_009828105.1

NCBI assembly name: ASM982810v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Sphingomonadales, Sphingomonadaceae, Altericroceibacterium, Altericroceibacterium indicum

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Sphingomonadales, Erythrobacteraceae, Altericroceibacterium, Altericroceibacterium indicum

Scaffolds: 20

Genes: 2,890 Protein-coding: 2,713 RNAs: 74 pseudogenes: 103

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_WTYQ01000001.1 Altericroceibacterium indicum strain DSM 18604 NODE_1_length_1030072, whole genome shotgun sequence 1,030,072
NZ_WTYQ01000002.1 Altericroceibacterium indicum strain DSM 18604 NODE_2_length_747857, whole genome shotgun sequence 747,857
NZ_WTYQ01000003.1 Altericroceibacterium indicum strain DSM 18604 NODE_3_length_529677, whole genome shotgun sequence 529,677
NZ_WTYQ01000004.1 Altericroceibacterium indicum strain DSM 18604 NODE_4_length_298040, whole genome shotgun sequence 298,040
NZ_WTYQ01000005.1 Altericroceibacterium indicum strain DSM 18604 NODE_5_length_232612, whole genome shotgun sequence 232,612
NZ_WTYQ01000006.1 Altericroceibacterium indicum strain DSM 18604 NODE_6_length_162631, whole genome shotgun sequence 162,631
NZ_WTYQ01000007.1 Altericroceibacterium indicum strain DSM 18604 NODE_7_length_51412, whole genome shotgun sequence 51,412
NZ_WTYQ01000008.1 Altericroceibacterium indicum strain DSM 18604 NODE_8_length_16899, whole genome shotgun sequence 16,899
NZ_WTYQ01000009.1 Altericroceibacterium indicum strain DSM 18604 NODE_9_length_6738, whole genome shotgun sequence 6,738
NZ_WTYQ01000010.1 Altericroceibacterium indicum strain DSM 18604 NODE_10_length_5800, whole genome shotgun sequence 5,800
NZ_WTYQ01000011.1 Altericroceibacterium indicum strain DSM 18604 NODE_11_length_4774, whole genome shotgun sequence 4,774
NZ_WTYQ01000012.1 Altericroceibacterium indicum strain DSM 18604 NODE_12_length_4143, whole genome shotgun sequence 4,143
NZ_WTYQ01000013.1 Altericroceibacterium indicum strain DSM 18604 NODE_13_length_3907, whole genome shotgun sequence 3,907
NZ_WTYQ01000014.1 Altericroceibacterium indicum strain DSM 18604 NODE_14_length_2859, whole genome shotgun sequence 2,859
NZ_WTYQ01000015.1 Altericroceibacterium indicum strain DSM 18604 NODE_15_length_1719, whole genome shotgun sequence 1,719
NZ_WTYQ01000016.1 Altericroceibacterium indicum strain DSM 18604 NODE_16_length_1662, whole genome shotgun sequence 1,662
NZ_WTYQ01000017.1 Altericroceibacterium indicum strain DSM 18604 NODE_17_length_1472, whole genome shotgun sequence 1,472
NZ_WTYQ01000018.1 Altericroceibacterium indicum strain DSM 18604 NODE_18_length_1452, whole genome shotgun sequence 1,452
NZ_WTYQ01000019.1 Altericroceibacterium indicum strain DSM 18604 NODE_19_length_1409, whole genome shotgun sequence 1,409
NZ_WTYQ01000020.1 Altericroceibacterium indicum strain DSM 18604 NODE_20_length_1123, whole genome shotgun sequence 1,123

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory