fast.genomicscompare 6,575 genera of bacteria & archaea

 

Kangsaoukella pontilimi GH1-50

Genome identifier: GCF_009830125.1

NCBI assembly name: ASM983012v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Rhodobacteraceae, Kangsaoukella, Kangsaoukella pontilimi

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Paracoccaceae, Kangsaoukella, Kangsaoukella pontilimi

Scaffolds: 10

Genes: 3,747 Protein-coding: 3,680 RNAs: 49 pseudogenes: 18

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_WUPT01000001.1 Kangsaoukella pontilimi strain GH1-50 contig1, whole genome shotgun sequence 1,843,059
NZ_WUPT01000002.1 Kangsaoukella pontilimi strain GH1-50 contig2, whole genome shotgun sequence 1,217,575
NZ_WUPT01000003.1 Kangsaoukella pontilimi strain GH1-50 contig3, whole genome shotgun sequence 318,123
NZ_WUPT01000004.1 Kangsaoukella pontilimi strain GH1-50 contig4, whole genome shotgun sequence 126,573
NZ_WUPT01000005.1 Kangsaoukella pontilimi strain GH1-50 contig5, whole genome shotgun sequence 92,841
NZ_WUPT01000006.1 Kangsaoukella pontilimi strain GH1-50 contig6, whole genome shotgun sequence 50,646
NZ_WUPT01000007.1 Kangsaoukella pontilimi strain GH1-50 contig7, whole genome shotgun sequence 31,487
NZ_WUPT01000008.1 Kangsaoukella pontilimi strain GH1-50 contig8, whole genome shotgun sequence 2,486
NZ_WUPT01000009.1 Kangsaoukella pontilimi strain GH1-50 contig9, whole genome shotgun sequence 1,884
NZ_WUPT01000010.1 Kangsaoukella pontilimi strain GH1-50 contig10, whole genome shotgun sequence 1,176

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory