fast.genomicscompare 6,575 genera of bacteria & archaea

 

Rubellimicrobium sp009904055 CFH 75288

Genome identifier: GCF_009904055.1

NCBI assembly name: ASM990405v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Rhodobacteraceae, Rubellimicrobium, Rubellimicrobium sp009904055

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Roseobacteraceae, Rubellimicrobium

Scaffolds: 80

Genes: 3,298 Protein-coding: 3,136 RNAs: 50 pseudogenes: 112

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_WYDP01000001.1 Rubellimicrobium sp. CFH 75288 contig1, whole genome shotgun sequence 597,422
NZ_WYDP01000002.1 Rubellimicrobium sp. CFH 75288 contig2, whole genome shotgun sequence 64,778
NZ_WYDP01000003.1 Rubellimicrobium sp. CFH 75288 contig3, whole genome shotgun sequence 500,335
NZ_WYDP01000004.1 Rubellimicrobium sp. CFH 75288 contig4, whole genome shotgun sequence 5,611
NZ_WYDP01000005.1 Rubellimicrobium sp. CFH 75288 contig5, whole genome shotgun sequence 429,731
NZ_WYDP01000006.1 Rubellimicrobium sp. CFH 75288 contig6, whole genome shotgun sequence 67,140
NZ_WYDP01000007.1 Rubellimicrobium sp. CFH 75288 contig7, whole genome shotgun sequence 66,339
NZ_WYDP01000008.1 Rubellimicrobium sp. CFH 75288 contig8, whole genome shotgun sequence 346,006
NZ_WYDP01000009.1 Rubellimicrobium sp. CFH 75288 contig9, whole genome shotgun sequence 29,732
NZ_WYDP01000010.1 Rubellimicrobium sp. CFH 75288 contig10, whole genome shotgun sequence 131,851
NZ_WYDP01000011.1 Rubellimicrobium sp. CFH 75288 contig11, whole genome shotgun sequence 9,698
NZ_WYDP01000012.1 Rubellimicrobium sp. CFH 75288 contig12, whole genome shotgun sequence 127,501
NZ_WYDP01000013.1 Rubellimicrobium sp. CFH 75288 contig13, whole genome shotgun sequence 11,202
NZ_WYDP01000014.1 Rubellimicrobium sp. CFH 75288 contig14, whole genome shotgun sequence 112,024
NZ_WYDP01000015.1 Rubellimicrobium sp. CFH 75288 contig15, whole genome shotgun sequence 57,034
NZ_WYDP01000016.1 Rubellimicrobium sp. CFH 75288 contig16, whole genome shotgun sequence 48,980
NZ_WYDP01000017.1 Rubellimicrobium sp. CFH 75288 contig17, whole genome shotgun sequence 104,080
NZ_WYDP01000018.1 Rubellimicrobium sp. CFH 75288 contig18, whole genome shotgun sequence 16,658
NZ_WYDP01000019.1 Rubellimicrobium sp. CFH 75288 contig19, whole genome shotgun sequence 81,871
NZ_WYDP01000020.1 Rubellimicrobium sp. CFH 75288 contig20, whole genome shotgun sequence 81,795
NZ_WYDP01000021.1 Rubellimicrobium sp. CFH 75288 contig21, whole genome shotgun sequence 14,426
NZ_WYDP01000022.1 Rubellimicrobium sp. CFH 75288 contig22, whole genome shotgun sequence 14,435
NZ_WYDP01000023.1 Rubellimicrobium sp. CFH 75288 contig23, whole genome shotgun sequence 71,671
NZ_WYDP01000024.1 Rubellimicrobium sp. CFH 75288 contig24, whole genome shotgun sequence 29,338
NZ_WYDP01000025.1 Rubellimicrobium sp. CFH 75288 contig25, whole genome shotgun sequence 38,826
NZ_WYDP01000026.1 Rubellimicrobium sp. CFH 75288 contig26, whole genome shotgun sequence 34,955
NZ_WYDP01000027.1 Rubellimicrobium sp. CFH 75288 contig27, whole genome shotgun sequence 21,567
NZ_WYDP01000028.1 Rubellimicrobium sp. CFH 75288 contig28, whole genome shotgun sequence 32,164
NZ_WYDP01000029.1 Rubellimicrobium sp. CFH 75288 contig29, whole genome shotgun sequence 26,047
NZ_WYDP01000030.1 Rubellimicrobium sp. CFH 75288 contig30, whole genome shotgun sequence 9,833
NZ_WYDP01000031.1 Rubellimicrobium sp. CFH 75288 contig31, whole genome shotgun sequence 11,484
NZ_WYDP01000032.1 Rubellimicrobium sp. CFH 75288 contig32, whole genome shotgun sequence 20,425
NZ_WYDP01000033.1 Rubellimicrobium sp. CFH 75288 contig33, whole genome shotgun sequence 18,535
NZ_WYDP01000034.1 Rubellimicrobium sp. CFH 75288 contig34, whole genome shotgun sequence 15,191
NZ_WYDP01000035.1 Rubellimicrobium sp. CFH 75288 contig35, whole genome shotgun sequence 11,275
NZ_WYDP01000036.1 Rubellimicrobium sp. CFH 75288 contig36, whole genome shotgun sequence 6,291
NZ_WYDP01000037.1 Rubellimicrobium sp. CFH 75288 contig37, whole genome shotgun sequence 912
NZ_WYDP01000038.1 Rubellimicrobium sp. CFH 75288 contig38, whole genome shotgun sequence 6,400
NZ_WYDP01000039.1 Rubellimicrobium sp. CFH 75288 contig39, whole genome shotgun sequence 6,037
NZ_WYDP01000040.1 Rubellimicrobium sp. CFH 75288 contig40, whole genome shotgun sequence 4,009
NZ_WYDP01000041.1 Rubellimicrobium sp. CFH 75288 contig41, whole genome shotgun sequence 3,803
NZ_WYDP01000042.1 Rubellimicrobium sp. CFH 75288 contig42, whole genome shotgun sequence 2,840
NZ_WYDP01000043.1 Rubellimicrobium sp. CFH 75288 contig43, whole genome shotgun sequence 1,611
NZ_WYDP01000044.1 Rubellimicrobium sp. CFH 75288 contig44, whole genome shotgun sequence 1,546
NZ_WYDP01000045.1 Rubellimicrobium sp. CFH 75288 contig45, whole genome shotgun sequence 1,482
NZ_WYDP01000046.1 Rubellimicrobium sp. CFH 75288 contig46, whole genome shotgun sequence 1,396
NZ_WYDP01000047.1 Rubellimicrobium sp. CFH 75288 contig47, whole genome shotgun sequence 1,313
NZ_WYDP01000048.1 Rubellimicrobium sp. CFH 75288 contig48, whole genome shotgun sequence 1,022
NZ_WYDP01000049.1 Rubellimicrobium sp. CFH 75288 contig49, whole genome shotgun sequence 214
NZ_WYDP01000050.1 Rubellimicrobium sp. CFH 75288 contig50, whole genome shotgun sequence 1,206
NZ_WYDP01000051.1 Rubellimicrobium sp. CFH 75288 contig51, whole genome shotgun sequence 1,174
NZ_WYDP01000052.1 Rubellimicrobium sp. CFH 75288 contig52, whole genome shotgun sequence 1,153
NZ_WYDP01000053.1 Rubellimicrobium sp. CFH 75288 contig53, whole genome shotgun sequence 1,068
NZ_WYDP01000054.1 Rubellimicrobium sp. CFH 75288 contig54, whole genome shotgun sequence 1,014
NZ_WYDP01000055.1 Rubellimicrobium sp. CFH 75288 contig55, whole genome shotgun sequence 947
NZ_WYDP01000056.1 Rubellimicrobium sp. CFH 75288 contig56, whole genome shotgun sequence 931
NZ_WYDP01000057.1 Rubellimicrobium sp. CFH 75288 contig57, whole genome shotgun sequence 910
NZ_WYDP01000058.1 Rubellimicrobium sp. CFH 75288 contig58, whole genome shotgun sequence 214
NZ_WYDP01000059.1 Rubellimicrobium sp. CFH 75288 contig59, whole genome shotgun sequence 672
NZ_WYDP01000060.1 Rubellimicrobium sp. CFH 75288 contig60, whole genome shotgun sequence 821
NZ_WYDP01000061.1 Rubellimicrobium sp. CFH 75288 contig61, whole genome shotgun sequence 735
NZ_WYDP01000062.1 Rubellimicrobium sp. CFH 75288 contig62, whole genome shotgun sequence 666
NZ_WYDP01000063.1 Rubellimicrobium sp. CFH 75288 contig63, whole genome shotgun sequence 617
NZ_WYDP01000064.1 Rubellimicrobium sp. CFH 75288 contig64, whole genome shotgun sequence 610
NZ_WYDP01000065.1 Rubellimicrobium sp. CFH 75288 contig65, whole genome shotgun sequence 593
NZ_WYDP01000066.1 Rubellimicrobium sp. CFH 75288 contig66, whole genome shotgun sequence 552
NZ_WYDP01000067.1 Rubellimicrobium sp. CFH 75288 contig67, whole genome shotgun sequence 514
NZ_WYDP01000068.1 Rubellimicrobium sp. CFH 75288 contig68, whole genome shotgun sequence 233
NZ_WYDP01000069.1 Rubellimicrobium sp. CFH 75288 contig69, whole genome shotgun sequence 261
NZ_WYDP01000070.1 Rubellimicrobium sp. CFH 75288 contig70, whole genome shotgun sequence 490
NZ_WYDP01000071.1 Rubellimicrobium sp. CFH 75288 contig71, whole genome shotgun sequence 452
NZ_WYDP01000072.1 Rubellimicrobium sp. CFH 75288 contig72, whole genome shotgun sequence 406
NZ_WYDP01000073.1 Rubellimicrobium sp. CFH 75288 contig73, whole genome shotgun sequence 383
NZ_WYDP01000074.1 Rubellimicrobium sp. CFH 75288 contig74, whole genome shotgun sequence 382
NZ_WYDP01000075.1 Rubellimicrobium sp. CFH 75288 contig75, whole genome shotgun sequence 380
NZ_WYDP01000076.1 Rubellimicrobium sp. CFH 75288 contig76, whole genome shotgun sequence 314
NZ_WYDP01000077.1 Rubellimicrobium sp. CFH 75288 contig77, whole genome shotgun sequence 308
NZ_WYDP01000078.1 Rubellimicrobium sp. CFH 75288 contig78, whole genome shotgun sequence 290
NZ_WYDP01000079.1 Rubellimicrobium sp. CFH 75288 contig79, whole genome shotgun sequence 265
NZ_WYDP01000080.1 Rubellimicrobium sp. CFH 75288 contig80, whole genome shotgun sequence 214

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory