fast.genomicscompare 6,575 genera of bacteria & archaea

 

Frigidibacter albus SP32

Genome identifier: GCF_009908165.1

NCBI assembly name: ASM990816v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Rhodobacteraceae, Frigidibacter, Frigidibacter albus

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Paracoccaceae, Frigidibacter, Frigidibacter albus

Scaffolds: 40

Genes: 4,024 Protein-coding: 3,866 RNAs: 53 pseudogenes: 105

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_JAAAUC010000001.1 Frigidibacter albus strain SP32 NODE_1_length_552085_cov_63.355364, whole genome shotgun sequence 552,085
NZ_JAAAUC010000002.1 Frigidibacter albus strain SP32 NODE_2_length_514049_cov_61.027923, whole genome shotgun sequence 514,049
NZ_JAAAUC010000003.1 Frigidibacter albus strain SP32 NODE_3_length_416962_cov_62.534231, whole genome shotgun sequence 416,962
NZ_JAAAUC010000004.1 Frigidibacter albus strain SP32 NODE_4_length_390958_cov_61.668256, whole genome shotgun sequence 390,958
NZ_JAAAUC010000005.1 Frigidibacter albus strain SP32 NODE_5_length_318621_cov_62.909424, whole genome shotgun sequence 318,621
NZ_JAAAUC010000006.1 Frigidibacter albus strain SP32 NODE_6_length_263548_cov_62.798786, whole genome shotgun sequence 263,548
NZ_JAAAUC010000007.1 Frigidibacter albus strain SP32 NODE_7_length_250745_cov_61.613328, whole genome shotgun sequence 250,745
NZ_JAAAUC010000008.1 Frigidibacter albus strain SP32 NODE_8_length_233698_cov_61.286423, whole genome shotgun sequence 233,698
NZ_JAAAUC010000009.1 Frigidibacter albus strain SP32 NODE_9_length_186575_cov_62.601739, whole genome shotgun sequence 186,575
NZ_JAAAUC010000010.1 Frigidibacter albus strain SP32 NODE_10_length_183411_cov_63.733872, whole genome shotgun sequence 183,411
NZ_JAAAUC010000011.1 Frigidibacter albus strain SP32 NODE_11_length_178408_cov_63.612864, whole genome shotgun sequence 178,408
NZ_JAAAUC010000012.1 Frigidibacter albus strain SP32 NODE_12_length_140652_cov_60.391688, whole genome shotgun sequence 140,652
NZ_JAAAUC010000013.1 Frigidibacter albus strain SP32 NODE_13_length_86526_cov_61.921886, whole genome shotgun sequence 86,526
NZ_JAAAUC010000014.1 Frigidibacter albus strain SP32 NODE_14_length_82865_cov_62.717699, whole genome shotgun sequence 82,865
NZ_JAAAUC010000015.1 Frigidibacter albus strain SP32 NODE_15_length_64965_cov_64.222848, whole genome shotgun sequence 64,965
NZ_JAAAUC010000016.1 Frigidibacter albus strain SP32 NODE_16_length_42640_cov_60.666361, whole genome shotgun sequence 42,640
NZ_JAAAUC010000017.1 Frigidibacter albus strain SP32 NODE_17_length_40860_cov_62.553949, whole genome shotgun sequence 40,860
NZ_JAAAUC010000018.1 Frigidibacter albus strain SP32 NODE_18_length_33898_cov_59.368689, whole genome shotgun sequence 33,898
NZ_JAAAUC010000019.1 Frigidibacter albus strain SP32 NODE_19_length_27776_cov_63.090347, whole genome shotgun sequence 27,776
NZ_JAAAUC010000020.1 Frigidibacter albus strain SP32 NODE_20_length_25371_cov_59.472191, whole genome shotgun sequence 25,371
NZ_JAAAUC010000021.1 Frigidibacter albus strain SP32 NODE_21_length_25309_cov_60.119252, whole genome shotgun sequence 25,309
NZ_JAAAUC010000022.1 Frigidibacter albus strain SP32 NODE_22_length_19576_cov_58.793151, whole genome shotgun sequence 19,576
NZ_JAAAUC010000023.1 Frigidibacter albus strain SP32 NODE_23_length_16757_cov_57.585448, whole genome shotgun sequence 16,757
NZ_JAAAUC010000024.1 Frigidibacter albus strain SP32 NODE_24_length_16367_cov_60.888978, whole genome shotgun sequence 16,367
NZ_JAAAUC010000025.1 Frigidibacter albus strain SP32 NODE_25_length_14259_cov_65.481036, whole genome shotgun sequence 14,259
NZ_JAAAUC010000026.1 Frigidibacter albus strain SP32 NODE_26_length_13466_cov_62.155634, whole genome shotgun sequence 13,466
NZ_JAAAUC010000027.1 Frigidibacter albus strain SP32 NODE_27_length_8776_cov_63.236790, whole genome shotgun sequence 8,776
NZ_JAAAUC010000028.1 Frigidibacter albus strain SP32 NODE_28_length_8278_cov_64.272359, whole genome shotgun sequence 8,278
NZ_JAAAUC010000029.1 Frigidibacter albus strain SP32 NODE_29_length_7053_cov_62.106988, whole genome shotgun sequence 7,053
NZ_JAAAUC010000030.1 Frigidibacter albus strain SP32 NODE_30_length_5709_cov_63.114654, whole genome shotgun sequence 5,709
NZ_JAAAUC010000031.1 Frigidibacter albus strain SP32 NODE_31_length_5638_cov_113.262566, whole genome shotgun sequence 5,638
NZ_JAAAUC010000032.1 Frigidibacter albus strain SP32 NODE_32_length_3926_cov_62.474072, whole genome shotgun sequence 3,926
NZ_JAAAUC010000033.1 Frigidibacter albus strain SP32 NODE_33_length_2961_cov_126.439308, whole genome shotgun sequence 2,961
NZ_JAAAUC010000034.1 Frigidibacter albus strain SP32 NODE_34_length_2373_cov_57.471060, whole genome shotgun sequence 2,373
NZ_JAAAUC010000035.1 Frigidibacter albus strain SP32 NODE_35_length_1949_cov_306.503842, whole genome shotgun sequence 1,949
NZ_JAAAUC010000036.1 Frigidibacter albus strain SP32 NODE_36_length_1829_cov_123.465335, whole genome shotgun sequence 1,829
NZ_JAAAUC010000037.1 Frigidibacter albus strain SP32 NODE_37_length_1490_cov_58.238445, whole genome shotgun sequence 1,490
NZ_JAAAUC010000038.1 Frigidibacter albus strain SP32 NODE_38_length_1459_cov_126.779279, whole genome shotgun sequence 1,459
NZ_JAAAUC010000039.1 Frigidibacter albus strain SP32 NODE_39_length_1316_cov_126.257359, whole genome shotgun sequence 1,316
NZ_JAAAUC010000040.1 Frigidibacter albus strain SP32 NODE_40_length_1241_cov_194.005386, whole genome shotgun sequence 1,241

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory