fast.genomicscompare 6,575 genera of bacteria & archaea

 

Stagnihabitans tardus CYK-10

Genome identifier: GCF_009925085.1

NCBI assembly name: ASM992508v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Rhodobacteraceae, Stagnihabitans, Stagnihabitans tardus

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Paracoccaceae, Stagnihabitans, Stagnihabitans tardus

Scaffolds: 114

Genes: 4,387 Protein-coding: 4,216 RNAs: 56 pseudogenes: 115

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_JAABNR010000001.1 Stagnihabitans tardus strain CYK-10 contig00001, whole genome shotgun sequence 423,872
NZ_JAABNR010000002.1 Stagnihabitans tardus strain CYK-10 contig00002, whole genome shotgun sequence 405,017
NZ_JAABNR010000003.1 Stagnihabitans tardus strain CYK-10 contig00003, whole genome shotgun sequence 280,426
NZ_JAABNR010000004.1 Stagnihabitans tardus strain CYK-10 contig00004, whole genome shotgun sequence 279,107
NZ_JAABNR010000005.1 Stagnihabitans tardus strain CYK-10 contig00005, whole genome shotgun sequence 252,753
NZ_JAABNR010000006.1 Stagnihabitans tardus strain CYK-10 contig00006, whole genome shotgun sequence 237,355
NZ_JAABNR010000007.1 Stagnihabitans tardus strain CYK-10 contig00007, whole genome shotgun sequence 199,609
NZ_JAABNR010000008.1 Stagnihabitans tardus strain CYK-10 contig00008, whole genome shotgun sequence 196,841
NZ_JAABNR010000009.1 Stagnihabitans tardus strain CYK-10 contig00009, whole genome shotgun sequence 193,916
NZ_JAABNR010000010.1 Stagnihabitans tardus strain CYK-10 contig00010, whole genome shotgun sequence 189,595
NZ_JAABNR010000011.1 Stagnihabitans tardus strain CYK-10 contig00011, whole genome shotgun sequence 176,144
NZ_JAABNR010000012.1 Stagnihabitans tardus strain CYK-10 contig00012, whole genome shotgun sequence 162,340
NZ_JAABNR010000013.1 Stagnihabitans tardus strain CYK-10 contig00013, whole genome shotgun sequence 139,281
NZ_JAABNR010000014.1 Stagnihabitans tardus strain CYK-10 contig00014, whole genome shotgun sequence 82,228
NZ_JAABNR010000015.1 Stagnihabitans tardus strain CYK-10 contig00015, whole genome shotgun sequence 80,249
NZ_JAABNR010000016.1 Stagnihabitans tardus strain CYK-10 contig00016, whole genome shotgun sequence 78,167
NZ_JAABNR010000017.1 Stagnihabitans tardus strain CYK-10 contig00017, whole genome shotgun sequence 77,501
NZ_JAABNR010000018.1 Stagnihabitans tardus strain CYK-10 contig00018, whole genome shotgun sequence 75,913
NZ_JAABNR010000019.1 Stagnihabitans tardus strain CYK-10 contig00019, whole genome shotgun sequence 70,524
NZ_JAABNR010000020.1 Stagnihabitans tardus strain CYK-10 contig00020, whole genome shotgun sequence 60,367
NZ_JAABNR010000021.1 Stagnihabitans tardus strain CYK-10 contig00021, whole genome shotgun sequence 58,018
NZ_JAABNR010000022.1 Stagnihabitans tardus strain CYK-10 contig00022, whole genome shotgun sequence 55,087
NZ_JAABNR010000023.1 Stagnihabitans tardus strain CYK-10 contig00023, whole genome shotgun sequence 49,130
NZ_JAABNR010000024.1 Stagnihabitans tardus strain CYK-10 contig00024, whole genome shotgun sequence 46,395
NZ_JAABNR010000025.1 Stagnihabitans tardus strain CYK-10 contig00025, whole genome shotgun sequence 45,478
NZ_JAABNR010000026.1 Stagnihabitans tardus strain CYK-10 contig00026, whole genome shotgun sequence 39,304
NZ_JAABNR010000027.1 Stagnihabitans tardus strain CYK-10 contig00027, whole genome shotgun sequence 38,030
NZ_JAABNR010000028.1 Stagnihabitans tardus strain CYK-10 contig00028, whole genome shotgun sequence 31,937
NZ_JAABNR010000029.1 Stagnihabitans tardus strain CYK-10 contig00029, whole genome shotgun sequence 31,573
NZ_JAABNR010000030.1 Stagnihabitans tardus strain CYK-10 contig00030, whole genome shotgun sequence 30,071
NZ_JAABNR010000031.1 Stagnihabitans tardus strain CYK-10 contig00031, whole genome shotgun sequence 29,636
NZ_JAABNR010000032.1 Stagnihabitans tardus strain CYK-10 contig00032, whole genome shotgun sequence 29,306
NZ_JAABNR010000033.1 Stagnihabitans tardus strain CYK-10 contig00033, whole genome shotgun sequence 27,388
NZ_JAABNR010000034.1 Stagnihabitans tardus strain CYK-10 contig00034, whole genome shotgun sequence 26,976
NZ_JAABNR010000035.1 Stagnihabitans tardus strain CYK-10 contig00035, whole genome shotgun sequence 25,486
NZ_JAABNR010000036.1 Stagnihabitans tardus strain CYK-10 contig00036, whole genome shotgun sequence 25,233
NZ_JAABNR010000037.1 Stagnihabitans tardus strain CYK-10 contig00037, whole genome shotgun sequence 24,309
NZ_JAABNR010000038.1 Stagnihabitans tardus strain CYK-10 contig00038, whole genome shotgun sequence 23,945
NZ_JAABNR010000039.1 Stagnihabitans tardus strain CYK-10 contig00039, whole genome shotgun sequence 22,461
NZ_JAABNR010000040.1 Stagnihabitans tardus strain CYK-10 contig00040, whole genome shotgun sequence 22,176
NZ_JAABNR010000041.1 Stagnihabitans tardus strain CYK-10 contig00041, whole genome shotgun sequence 22,059
NZ_JAABNR010000042.1 Stagnihabitans tardus strain CYK-10 contig00042, whole genome shotgun sequence 19,612
NZ_JAABNR010000043.1 Stagnihabitans tardus strain CYK-10 contig00043, whole genome shotgun sequence 17,623
NZ_JAABNR010000044.1 Stagnihabitans tardus strain CYK-10 contig00044, whole genome shotgun sequence 15,330
NZ_JAABNR010000045.1 Stagnihabitans tardus strain CYK-10 contig00045, whole genome shotgun sequence 15,196
NZ_JAABNR010000046.1 Stagnihabitans tardus strain CYK-10 contig00046, whole genome shotgun sequence 13,884
NZ_JAABNR010000047.1 Stagnihabitans tardus strain CYK-10 contig00047, whole genome shotgun sequence 13,204
NZ_JAABNR010000048.1 Stagnihabitans tardus strain CYK-10 contig00048, whole genome shotgun sequence 12,604
NZ_JAABNR010000049.1 Stagnihabitans tardus strain CYK-10 contig00049, whole genome shotgun sequence 11,406
NZ_JAABNR010000050.1 Stagnihabitans tardus strain CYK-10 contig00050, whole genome shotgun sequence 8,227
NZ_JAABNR010000051.1 Stagnihabitans tardus strain CYK-10 contig00051, whole genome shotgun sequence 7,232
NZ_JAABNR010000052.1 Stagnihabitans tardus strain CYK-10 contig00052, whole genome shotgun sequence 6,287
NZ_JAABNR010000053.1 Stagnihabitans tardus strain CYK-10 contig00053, whole genome shotgun sequence 5,845
NZ_JAABNR010000054.1 Stagnihabitans tardus strain CYK-10 contig00054, whole genome shotgun sequence 5,615
NZ_JAABNR010000055.1 Stagnihabitans tardus strain CYK-10 contig00055, whole genome shotgun sequence 5,613
NZ_JAABNR010000056.1 Stagnihabitans tardus strain CYK-10 contig00056, whole genome shotgun sequence 3,949
NZ_JAABNR010000057.1 Stagnihabitans tardus strain CYK-10 contig00057, whole genome shotgun sequence 3,908
NZ_JAABNR010000058.1 Stagnihabitans tardus strain CYK-10 contig00058, whole genome shotgun sequence 3,833
NZ_JAABNR010000059.1 Stagnihabitans tardus strain CYK-10 contig00059, whole genome shotgun sequence 3,162
NZ_JAABNR010000060.1 Stagnihabitans tardus strain CYK-10 contig00060, whole genome shotgun sequence 2,922
NZ_JAABNR010000061.1 Stagnihabitans tardus strain CYK-10 contig00061, whole genome shotgun sequence 2,492
NZ_JAABNR010000062.1 Stagnihabitans tardus strain CYK-10 contig00062, whole genome shotgun sequence 2,437
NZ_JAABNR010000063.1 Stagnihabitans tardus strain CYK-10 contig00063, whole genome shotgun sequence 2,364
NZ_JAABNR010000064.1 Stagnihabitans tardus strain CYK-10 contig00064, whole genome shotgun sequence 2,143
NZ_JAABNR010000065.1 Stagnihabitans tardus strain CYK-10 contig00065, whole genome shotgun sequence 1,927
NZ_JAABNR010000066.1 Stagnihabitans tardus strain CYK-10 contig00066, whole genome shotgun sequence 1,799
NZ_JAABNR010000067.1 Stagnihabitans tardus strain CYK-10 contig00067, whole genome shotgun sequence 1,759
NZ_JAABNR010000068.1 Stagnihabitans tardus strain CYK-10 contig00068, whole genome shotgun sequence 1,720
NZ_JAABNR010000069.1 Stagnihabitans tardus strain CYK-10 contig00069, whole genome shotgun sequence 1,712
NZ_JAABNR010000070.1 Stagnihabitans tardus strain CYK-10 contig00070, whole genome shotgun sequence 1,681
NZ_JAABNR010000071.1 Stagnihabitans tardus strain CYK-10 contig00071, whole genome shotgun sequence 1,592
NZ_JAABNR010000072.1 Stagnihabitans tardus strain CYK-10 contig00072, whole genome shotgun sequence 1,569
NZ_JAABNR010000073.1 Stagnihabitans tardus strain CYK-10 contig00073, whole genome shotgun sequence 1,517
NZ_JAABNR010000074.1 Stagnihabitans tardus strain CYK-10 contig00074, whole genome shotgun sequence 1,333
NZ_JAABNR010000075.1 Stagnihabitans tardus strain CYK-10 contig00075, whole genome shotgun sequence 1,300
NZ_JAABNR010000076.1 Stagnihabitans tardus strain CYK-10 contig00076, whole genome shotgun sequence 1,231
NZ_JAABNR010000077.1 Stagnihabitans tardus strain CYK-10 contig00077, whole genome shotgun sequence 1,213
NZ_JAABNR010000078.1 Stagnihabitans tardus strain CYK-10 contig00078, whole genome shotgun sequence 1,179
NZ_JAABNR010000079.1 Stagnihabitans tardus strain CYK-10 contig00079, whole genome shotgun sequence 1,112
NZ_JAABNR010000080.1 Stagnihabitans tardus strain CYK-10 contig00080, whole genome shotgun sequence 1,005
NZ_JAABNR010000081.1 Stagnihabitans tardus strain CYK-10 contig00081, whole genome shotgun sequence 964
NZ_JAABNR010000082.1 Stagnihabitans tardus strain CYK-10 contig00082, whole genome shotgun sequence 964
NZ_JAABNR010000083.1 Stagnihabitans tardus strain CYK-10 contig00083, whole genome shotgun sequence 951
NZ_JAABNR010000084.1 Stagnihabitans tardus strain CYK-10 contig00084, whole genome shotgun sequence 895
NZ_JAABNR010000085.1 Stagnihabitans tardus strain CYK-10 contig00085, whole genome shotgun sequence 816
NZ_JAABNR010000086.1 Stagnihabitans tardus strain CYK-10 contig00086, whole genome shotgun sequence 786
NZ_JAABNR010000087.1 Stagnihabitans tardus strain CYK-10 contig00087, whole genome shotgun sequence 786
NZ_JAABNR010000088.1 Stagnihabitans tardus strain CYK-10 contig00088, whole genome shotgun sequence 756
NZ_JAABNR010000089.1 Stagnihabitans tardus strain CYK-10 contig00089, whole genome shotgun sequence 756
NZ_JAABNR010000090.1 Stagnihabitans tardus strain CYK-10 contig00090, whole genome shotgun sequence 738
NZ_JAABNR010000091.1 Stagnihabitans tardus strain CYK-10 contig00091, whole genome shotgun sequence 702
NZ_JAABNR010000092.1 Stagnihabitans tardus strain CYK-10 contig00092, whole genome shotgun sequence 695
NZ_JAABNR010000093.1 Stagnihabitans tardus strain CYK-10 contig00093, whole genome shotgun sequence 678
NZ_JAABNR010000094.1 Stagnihabitans tardus strain CYK-10 contig00094, whole genome shotgun sequence 633
NZ_JAABNR010000095.1 Stagnihabitans tardus strain CYK-10 contig00095, whole genome shotgun sequence 523
NZ_JAABNR010000096.1 Stagnihabitans tardus strain CYK-10 contig00096, whole genome shotgun sequence 415
NZ_JAABNR010000097.1 Stagnihabitans tardus strain CYK-10 contig00097, whole genome shotgun sequence 393
NZ_JAABNR010000098.1 Stagnihabitans tardus strain CYK-10 contig00098, whole genome shotgun sequence 383
NZ_JAABNR010000099.1 Stagnihabitans tardus strain CYK-10 contig00099, whole genome shotgun sequence 362
NZ_JAABNR010000100.1 Stagnihabitans tardus strain CYK-10 contig00100, whole genome shotgun sequence 355
NZ_JAABNR010000101.1 Stagnihabitans tardus strain CYK-10 contig00101, whole genome shotgun sequence 307
NZ_JAABNR010000102.1 Stagnihabitans tardus strain CYK-10 contig00102, whole genome shotgun sequence 290
NZ_JAABNR010000103.1 Stagnihabitans tardus strain CYK-10 contig00103, whole genome shotgun sequence 261
NZ_JAABNR010000104.1 Stagnihabitans tardus strain CYK-10 contig00104, whole genome shotgun sequence 259
NZ_JAABNR010000105.1 Stagnihabitans tardus strain CYK-10 contig00105, whole genome shotgun sequence 257
NZ_JAABNR010000106.1 Stagnihabitans tardus strain CYK-10 contig00106, whole genome shotgun sequence 254
NZ_JAABNR010000107.1 Stagnihabitans tardus strain CYK-10 contig00107, whole genome shotgun sequence 254
NZ_JAABNR010000108.1 Stagnihabitans tardus strain CYK-10 contig00108, whole genome shotgun sequence 253
NZ_JAABNR010000109.1 Stagnihabitans tardus strain CYK-10 contig00109, whole genome shotgun sequence 252
NZ_JAABNR010000110.1 Stagnihabitans tardus strain CYK-10 contig00110, whole genome shotgun sequence 252
NZ_JAABNR010000111.1 Stagnihabitans tardus strain CYK-10 contig00111, whole genome shotgun sequence 252
NZ_JAABNR010000112.1 Stagnihabitans tardus strain CYK-10 contig00112, whole genome shotgun sequence 251
NZ_JAABNR010000113.1 Stagnihabitans tardus strain CYK-10 contig00113, whole genome shotgun sequence 251
NZ_JAABNR010000114.1 Stagnihabitans tardus strain CYK-10 contig00114, whole genome shotgun sequence 246

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory