fast.genomicscompare 6,575 genera of bacteria & archaea

 

QVMG01 sp010500925 52

Genome identifier: GCF_010500925.1

NCBI assembly name: ASM1050092v1

GTDB taxonomy: Bacteria, Bacteroidota, Bacteroidia, Bacteroidales, Tannerellaceae, QVMG01, QVMG01 sp010500925

NCBI taxonomy: Bacteria, Bacteroidota, Bacteroidia, Bacteroidales, Tannerellaceae, Parabacteroides

Scaffolds: 61

Genes: 2,447 Protein-coding: 2,331 RNAs: 59 pseudogenes: 57

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_QVMG01000001.1 Parabacteroides sp. 52 scaffold1_size581617, whole genome shotgun sequence 581,617
NZ_QVMG01000002.1 Parabacteroides sp. 52 scaffold2_size238751, whole genome shotgun sequence 238,751
NZ_QVMG01000003.1 Parabacteroides sp. 52 scaffold3_size147969, whole genome shotgun sequence 147,969
NZ_QVMG01000004.1 Parabacteroides sp. 52 scaffold4_size145410, whole genome shotgun sequence 145,410
NZ_QVMG01000005.1 Parabacteroides sp. 52 scaffold5_size136473, whole genome shotgun sequence 136,473
NZ_QVMG01000006.1 Parabacteroides sp. 52 scaffold6_size121968, whole genome shotgun sequence 121,968
NZ_QVMG01000007.1 Parabacteroides sp. 52 scaffold7_size101067, whole genome shotgun sequence 101,067
NZ_QVMG01000008.1 Parabacteroides sp. 52 scaffold8_size161090, whole genome shotgun sequence 161,090
NZ_QVMG01000009.1 Parabacteroides sp. 52 scaffold9_size124728, whole genome shotgun sequence 124,728
NZ_QVMG01000010.1 Parabacteroides sp. 52 scaffold10_size105315, whole genome shotgun sequence 105,315
NZ_QVMG01000011.1 Parabacteroides sp. 52 scaffold11_size163935, whole genome shotgun sequence 163,935
NZ_QVMG01000012.1 Parabacteroides sp. 52 scaffold12_size104585, whole genome shotgun sequence 104,585
NZ_QVMG01000013.1 Parabacteroides sp. 52 scaffold13_size61679, whole genome shotgun sequence 61,679
NZ_QVMG01000014.1 Parabacteroides sp. 52 scaffold14_size59122, whole genome shotgun sequence 59,122
NZ_QVMG01000015.1 Parabacteroides sp. 52 scaffold15_size55379, whole genome shotgun sequence 55,379
NZ_QVMG01000016.1 Parabacteroides sp. 52 scaffold16_size58687, whole genome shotgun sequence 58,687
NZ_QVMG01000017.1 Parabacteroides sp. 52 scaffold17_size42037, whole genome shotgun sequence 42,037
NZ_QVMG01000018.1 Parabacteroides sp. 52 scaffold18_size57475, whole genome shotgun sequence 57,475
NZ_QVMG01000019.1 Parabacteroides sp. 52 scaffold19_size63346, whole genome shotgun sequence 63,346
NZ_QVMG01000020.1 Parabacteroides sp. 52 scaffold20_size105513, whole genome shotgun sequence 105,513
NZ_QVMG01000021.1 Parabacteroides sp. 52 scaffold21_size36194, whole genome shotgun sequence 36,194
NZ_QVMG01000022.1 Parabacteroides sp. 52 scaffold22_size26061, whole genome shotgun sequence 26,061
NZ_QVMG01000023.1 Parabacteroides sp. 52 scaffold23_size25935, whole genome shotgun sequence 25,935
NZ_QVMG01000024.1 Parabacteroides sp. 52 scaffold24_size19957, whole genome shotgun sequence 19,957
NZ_QVMG01000025.1 Parabacteroides sp. 52 scaffold25_size19485, whole genome shotgun sequence 19,485
NZ_QVMG01000026.1 Parabacteroides sp. 52 scaffold26_size19181, whole genome shotgun sequence 19,181
NZ_QVMG01000027.1 Parabacteroides sp. 52 scaffold27_size17301, whole genome shotgun sequence 17,301
NZ_QVMG01000028.1 Parabacteroides sp. 52 scaffold28_size16939, whole genome shotgun sequence 16,939
NZ_QVMG01000029.1 Parabacteroides sp. 52 scaffold29_size14816, whole genome shotgun sequence 14,816
NZ_QVMG01000030.1 Parabacteroides sp. 52 scaffold30_size23523, whole genome shotgun sequence 23,523
NZ_QVMG01000031.1 Parabacteroides sp. 52 scaffold31_size10711, whole genome shotgun sequence 10,711
NZ_QVMG01000032.1 Parabacteroides sp. 52 scaffold32_size10596, whole genome shotgun sequence 10,596
NZ_QVMG01000033.1 Parabacteroides sp. 52 scaffold33_size9406, whole genome shotgun sequence 9,406
NZ_QVMG01000034.1 Parabacteroides sp. 52 scaffold34_size7898, whole genome shotgun sequence 7,898
NZ_QVMG01000035.1 Parabacteroides sp. 52 scaffold35_size7357, whole genome shotgun sequence 7,357
NZ_QVMG01000036.1 Parabacteroides sp. 52 scaffold36_size7059, whole genome shotgun sequence 7,059
NZ_QVMG01000037.1 Parabacteroides sp. 52 scaffold37_size15243, whole genome shotgun sequence 15,243
NZ_QVMG01000038.1 Parabacteroides sp. 52 scaffold38_size5981, whole genome shotgun sequence 5,981
NZ_QVMG01000039.1 Parabacteroides sp. 52 scaffold39_size5245, whole genome shotgun sequence 5,245
NZ_QVMG01000040.1 Parabacteroides sp. 52 scaffold40_size5169, whole genome shotgun sequence 5,169
NZ_QVMG01000041.1 Parabacteroides sp. 52 scaffold41_size5042, whole genome shotgun sequence 5,042
NZ_QVMG01000042.1 Parabacteroides sp. 52 scaffold42_size4968, whole genome shotgun sequence 4,968
NZ_QVMG01000043.1 Parabacteroides sp. 52 scaffold43_size4823, whole genome shotgun sequence 4,823
NZ_QVMG01000044.1 Parabacteroides sp. 52 scaffold44_size4623, whole genome shotgun sequence 4,623
NZ_QVMG01000045.1 Parabacteroides sp. 52 scaffold45_size4567, whole genome shotgun sequence 4,567
NZ_QVMG01000046.1 Parabacteroides sp. 52 scaffold46_size4509, whole genome shotgun sequence 4,509
NZ_QVMG01000047.1 Parabacteroides sp. 52 scaffold47_size4130, whole genome shotgun sequence 4,130
NZ_QVMG01000048.1 Parabacteroides sp. 52 scaffold48_size3509, whole genome shotgun sequence 3,509
NZ_QVMG01000049.1 Parabacteroides sp. 52 scaffold49_size3011, whole genome shotgun sequence 3,011
NZ_QVMG01000050.1 Parabacteroides sp. 52 scaffold50_size5411, whole genome shotgun sequence 5,411
NZ_QVMG01000051.1 Parabacteroides sp. 52 scaffold51_size2822, whole genome shotgun sequence 2,822
NZ_QVMG01000052.1 Parabacteroides sp. 52 scaffold52_size2456, whole genome shotgun sequence 2,456
NZ_QVMG01000053.1 Parabacteroides sp. 52 scaffold53_size2358, whole genome shotgun sequence 2,358
NZ_QVMG01000054.1 Parabacteroides sp. 52 scaffold54_size3623, whole genome shotgun sequence 3,623
NZ_QVMG01000055.1 Parabacteroides sp. 52 scaffold55_size3127, whole genome shotgun sequence 3,127
NZ_QVMG01000056.1 Parabacteroides sp. 52 scaffold56_size1700, whole genome shotgun sequence 1,700
NZ_QVMG01000057.1 Parabacteroides sp. 52 scaffold57_size3128, whole genome shotgun sequence 3,128
NZ_QVMG01000058.1 Parabacteroides sp. 52 scaffold58_size1078, whole genome shotgun sequence 1,078
NZ_QVMG01000059.1 Parabacteroides sp. 52 scaffold59_size881, whole genome shotgun sequence 881
NZ_QVMG01000060.1 Parabacteroides sp. 52 scaffold60_size779, whole genome shotgun sequence 779
NZ_QVMG01000061.1 Parabacteroides sp. 52 scaffold61_size742, whole genome shotgun sequence 742

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory