fast.genomicscompare 6,575 genera of bacteria & archaea

 

QVMH01 sp010501035 221

Genome identifier: GCF_010501035.1

NCBI assembly name: ASM1050103v1

GTDB taxonomy: Bacteria, Bacteroidota, Bacteroidia, Bacteroidales, Paludibacteraceae, QVMH01, QVMH01 sp010501035

NCBI taxonomy: Bacteria, Bacteroidota, Bacteroidia, Bacteroidales, Paludibacteraceae, Paludibacter

Scaffolds: 102

Genes: 2,590 Protein-coding: 2,497 RNAs: 50 pseudogenes: 43

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_QVMH01000001.1 Paludibacter sp. 221 scaffold1_size88575, whole genome shotgun sequence 88,575
NZ_QVMH01000002.1 Paludibacter sp. 221 scaffold2_size116676, whole genome shotgun sequence 116,676
NZ_QVMH01000003.1 Paludibacter sp. 221 scaffold3_size137094, whole genome shotgun sequence 137,094
NZ_QVMH01000004.1 Paludibacter sp. 221 scaffold4_size60550, whole genome shotgun sequence 60,550
NZ_QVMH01000005.1 Paludibacter sp. 221 scaffold5_size105101, whole genome shotgun sequence 105,101
NZ_QVMH01000006.1 Paludibacter sp. 221 scaffold6_size106261, whole genome shotgun sequence 106,261
NZ_QVMH01000007.1 Paludibacter sp. 221 scaffold7_size54935, whole genome shotgun sequence 54,935
NZ_QVMH01000008.1 Paludibacter sp. 221 scaffold8_size82125, whole genome shotgun sequence 82,125
NZ_QVMH01000009.1 Paludibacter sp. 221 scaffold9_size65070, whole genome shotgun sequence 65,070
NZ_QVMH01000010.1 Paludibacter sp. 221 scaffold10_size48278, whole genome shotgun sequence 48,278
NZ_QVMH01000011.1 Paludibacter sp. 221 scaffold11_size105723, whole genome shotgun sequence 105,723
NZ_QVMH01000012.1 Paludibacter sp. 221 scaffold12_size47308, whole genome shotgun sequence 47,308
NZ_QVMH01000013.1 Paludibacter sp. 221 scaffold13_size66421, whole genome shotgun sequence 66,421
NZ_QVMH01000014.1 Paludibacter sp. 221 scaffold14_size99757, whole genome shotgun sequence 99,757
NZ_QVMH01000015.1 Paludibacter sp. 221 scaffold15_size51189, whole genome shotgun sequence 51,189
NZ_QVMH01000016.1 Paludibacter sp. 221 scaffold16_size59238, whole genome shotgun sequence 59,238
NZ_QVMH01000017.1 Paludibacter sp. 221 scaffold17_size42839, whole genome shotgun sequence 42,839
NZ_QVMH01000018.1 Paludibacter sp. 221 scaffold18_size51319, whole genome shotgun sequence 51,319
NZ_QVMH01000019.1 Paludibacter sp. 221 scaffold19_size39218, whole genome shotgun sequence 39,218
NZ_QVMH01000020.1 Paludibacter sp. 221 scaffold20_size67188, whole genome shotgun sequence 67,188
NZ_QVMH01000021.1 Paludibacter sp. 221 scaffold21_size48590, whole genome shotgun sequence 48,590
NZ_QVMH01000022.1 Paludibacter sp. 221 scaffold22_size32354, whole genome shotgun sequence 32,354
NZ_QVMH01000023.1 Paludibacter sp. 221 scaffold23_size47398, whole genome shotgun sequence 47,398
NZ_QVMH01000024.1 Paludibacter sp. 221 scaffold24_size29948, whole genome shotgun sequence 29,948
NZ_QVMH01000025.1 Paludibacter sp. 221 scaffold25_size32303, whole genome shotgun sequence 32,303
NZ_QVMH01000026.1 Paludibacter sp. 221 scaffold26_size29712, whole genome shotgun sequence 29,712
NZ_QVMH01000027.1 Paludibacter sp. 221 scaffold27_size26417, whole genome shotgun sequence 26,417
NZ_QVMH01000028.1 Paludibacter sp. 221 scaffold28_size26364, whole genome shotgun sequence 26,364
NZ_QVMH01000029.1 Paludibacter sp. 221 scaffold29_size57292, whole genome shotgun sequence 57,292
NZ_QVMH01000030.1 Paludibacter sp. 221 scaffold30_size25685, whole genome shotgun sequence 25,685
NZ_QVMH01000031.1 Paludibacter sp. 221 scaffold31_size25299, whole genome shotgun sequence 25,299
NZ_QVMH01000032.1 Paludibacter sp. 221 scaffold32_size39085, whole genome shotgun sequence 39,085
NZ_QVMH01000033.1 Paludibacter sp. 221 scaffold33_size30761, whole genome shotgun sequence 30,761
NZ_QVMH01000034.1 Paludibacter sp. 221 scaffold34_size49099, whole genome shotgun sequence 49,099
NZ_QVMH01000035.1 Paludibacter sp. 221 scaffold35_size36184, whole genome shotgun sequence 36,184
NZ_QVMH01000036.1 Paludibacter sp. 221 scaffold36_size52052, whole genome shotgun sequence 52,052
NZ_QVMH01000037.1 Paludibacter sp. 221 scaffold37_size116183, whole genome shotgun sequence 116,183
NZ_QVMH01000038.1 Paludibacter sp. 221 scaffold38_size35116, whole genome shotgun sequence 35,116
NZ_QVMH01000039.1 Paludibacter sp. 221 scaffold39_size20830, whole genome shotgun sequence 20,830
NZ_QVMH01000040.1 Paludibacter sp. 221 scaffold40_size53863, whole genome shotgun sequence 53,863
NZ_QVMH01000041.1 Paludibacter sp. 221 scaffold41_size19617, whole genome shotgun sequence 19,617
NZ_QVMH01000042.1 Paludibacter sp. 221 scaffold42_size29083, whole genome shotgun sequence 29,083
NZ_QVMH01000043.1 Paludibacter sp. 221 scaffold43_size19468, whole genome shotgun sequence 19,468
NZ_QVMH01000044.1 Paludibacter sp. 221 scaffold44_size19103, whole genome shotgun sequence 19,103
NZ_QVMH01000045.1 Paludibacter sp. 221 scaffold45_size34274, whole genome shotgun sequence 34,274
NZ_QVMH01000046.1 Paludibacter sp. 221 scaffold46_size51129, whole genome shotgun sequence 51,129
NZ_QVMH01000047.1 Paludibacter sp. 221 scaffold47_size28794, whole genome shotgun sequence 28,794
NZ_QVMH01000048.1 Paludibacter sp. 221 scaffold48_size18758, whole genome shotgun sequence 18,758
NZ_QVMH01000049.1 Paludibacter sp. 221 scaffold49_size55756, whole genome shotgun sequence 55,756
NZ_QVMH01000050.1 Paludibacter sp. 221 scaffold50_size24369, whole genome shotgun sequence 24,369
NZ_QVMH01000051.1 Paludibacter sp. 221 scaffold51_size36108, whole genome shotgun sequence 36,108
NZ_QVMH01000052.1 Paludibacter sp. 221 scaffold52_size17841, whole genome shotgun sequence 17,841
NZ_QVMH01000053.1 Paludibacter sp. 221 scaffold53_size16948, whole genome shotgun sequence 16,948
NZ_QVMH01000054.1 Paludibacter sp. 221 scaffold54_size23244, whole genome shotgun sequence 23,244
NZ_QVMH01000055.1 Paludibacter sp. 221 scaffold55_size23952, whole genome shotgun sequence 23,952
NZ_QVMH01000056.1 Paludibacter sp. 221 scaffold56_size22217, whole genome shotgun sequence 22,217
NZ_QVMH01000057.1 Paludibacter sp. 221 scaffold57_size15167, whole genome shotgun sequence 15,167
NZ_QVMH01000058.1 Paludibacter sp. 221 scaffold58_size32755, whole genome shotgun sequence 32,755
NZ_QVMH01000059.1 Paludibacter sp. 221 scaffold59_size15101, whole genome shotgun sequence 15,101
NZ_QVMH01000060.1 Paludibacter sp. 221 scaffold60_size14703, whole genome shotgun sequence 14,703
NZ_QVMH01000061.1 Paludibacter sp. 221 scaffold61_size19277, whole genome shotgun sequence 19,277
NZ_QVMH01000062.1 Paludibacter sp. 221 scaffold62_size13146, whole genome shotgun sequence 13,146
NZ_QVMH01000063.1 Paludibacter sp. 221 scaffold63_size12148, whole genome shotgun sequence 12,148
NZ_QVMH01000064.1 Paludibacter sp. 221 scaffold64_size10942, whole genome shotgun sequence 10,942
NZ_QVMH01000065.1 Paludibacter sp. 221 scaffold65_size24163, whole genome shotgun sequence 24,163
NZ_QVMH01000066.1 Paludibacter sp. 221 scaffold66_size12436, whole genome shotgun sequence 12,436
NZ_QVMH01000067.1 Paludibacter sp. 221 scaffold67_size13697, whole genome shotgun sequence 13,697
NZ_QVMH01000068.1 Paludibacter sp. 221 scaffold68_size12646, whole genome shotgun sequence 12,646
NZ_QVMH01000069.1 Paludibacter sp. 221 scaffold69_size14131, whole genome shotgun sequence 14,131
NZ_QVMH01000070.1 Paludibacter sp. 221 scaffold70_size14741, whole genome shotgun sequence 14,741
NZ_QVMH01000071.1 Paludibacter sp. 221 scaffold71_size7629, whole genome shotgun sequence 7,629
NZ_QVMH01000072.1 Paludibacter sp. 221 scaffold72_size6590, whole genome shotgun sequence 6,590
NZ_QVMH01000073.1 Paludibacter sp. 221 scaffold73_size6502, whole genome shotgun sequence 6,502
NZ_QVMH01000074.1 Paludibacter sp. 221 scaffold74_size6465, whole genome shotgun sequence 6,465
NZ_QVMH01000075.1 Paludibacter sp. 221 scaffold75_size6463, whole genome shotgun sequence 6,463
NZ_QVMH01000076.1 Paludibacter sp. 221 scaffold76_size12324, whole genome shotgun sequence 12,324
NZ_QVMH01000077.1 Paludibacter sp. 221 scaffold77_size6425, whole genome shotgun sequence 6,425
NZ_QVMH01000078.1 Paludibacter sp. 221 scaffold78_size6330, whole genome shotgun sequence 6,330
NZ_QVMH01000079.1 Paludibacter sp. 221 scaffold79_size5788, whole genome shotgun sequence 5,788
NZ_QVMH01000080.1 Paludibacter sp. 221 scaffold80_size6919, whole genome shotgun sequence 6,919
NZ_QVMH01000081.1 Paludibacter sp. 221 scaffold81_size6449, whole genome shotgun sequence 6,449
NZ_QVMH01000082.1 Paludibacter sp. 221 scaffold82_size5723, whole genome shotgun sequence 5,723
NZ_QVMH01000083.1 Paludibacter sp. 221 scaffold83_size4441, whole genome shotgun sequence 4,441
NZ_QVMH01000084.1 Paludibacter sp. 221 scaffold84_size6561, whole genome shotgun sequence 6,561
NZ_QVMH01000085.1 Paludibacter sp. 221 scaffold85_size3441, whole genome shotgun sequence 3,441
NZ_QVMH01000086.1 Paludibacter sp. 221 scaffold86_size3062, whole genome shotgun sequence 3,062
NZ_QVMH01000087.1 Paludibacter sp. 221 scaffold87_size2915, whole genome shotgun sequence 2,915
NZ_QVMH01000088.1 Paludibacter sp. 221 scaffold88_size2654, whole genome shotgun sequence 2,654
NZ_QVMH01000089.1 Paludibacter sp. 221 scaffold89_size5329, whole genome shotgun sequence 5,329
NZ_QVMH01000090.1 Paludibacter sp. 221 scaffold90_size2569, whole genome shotgun sequence 2,569
NZ_QVMH01000091.1 Paludibacter sp. 221 scaffold91_size2403, whole genome shotgun sequence 2,403
NZ_QVMH01000092.1 Paludibacter sp. 221 scaffold92_size4198, whole genome shotgun sequence 4,198
NZ_QVMH01000093.1 Paludibacter sp. 221 scaffold93_size2058, whole genome shotgun sequence 2,058
NZ_QVMH01000094.1 Paludibacter sp. 221 scaffold94_size2014, whole genome shotgun sequence 2,014
NZ_QVMH01000095.1 Paludibacter sp. 221 scaffold95_size1595, whole genome shotgun sequence 1,595
NZ_QVMH01000096.1 Paludibacter sp. 221 scaffold96_size1533, whole genome shotgun sequence 1,533
NZ_QVMH01000097.1 Paludibacter sp. 221 scaffold97_size1392, whole genome shotgun sequence 1,392
NZ_QVMH01000098.1 Paludibacter sp. 221 scaffold98_size1282, whole genome shotgun sequence 1,282
NZ_QVMH01000099.1 Paludibacter sp. 221 scaffold99_size1260, whole genome shotgun sequence 1,260
NZ_QVMH01000100.1 Paludibacter sp. 221 scaffold100_size935, whole genome shotgun sequence 935
NZ_QVMH01000101.1 Paludibacter sp. 221 scaffold101_size777, whole genome shotgun sequence 777
NZ_QVMH01000102.1 Paludibacter sp. 221 scaffold103_size605, whole genome shotgun sequence 605

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory