fast.genomicscompare 6,575 genera of bacteria & archaea

 

Spongiivirga citrea KCTC 32990

Genome identifier: GCF_010671565.1

NCBI assembly name: ASM1067156v1

GTDB taxonomy: Bacteria, Bacteroidota, Bacteroidia, Flavobacteriales, Flavobacteriaceae, Spongiivirga, Spongiivirga citrea

NCBI taxonomy: Bacteria, Bacteroidota, Flavobacteriia, Flavobacteriales, Flavobacteriaceae, Spongiivirga, Spongiivirga citrea

Scaffolds: 17

Genes: 3,657 Protein-coding: 3,602 RNAs: 48 pseudogenes: 7

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_JAABOQ010000001.1 Spongiivirga citrea strain KCTC 32990 Scaffold1_1, whole genome shotgun sequence 786,345
NZ_JAABOQ010000002.1 Spongiivirga citrea strain KCTC 32990 Scaffold2_1, whole genome shotgun sequence 700,823
NZ_JAABOQ010000003.1 Spongiivirga citrea strain KCTC 32990 Scaffold3_1, whole genome shotgun sequence 637,254
NZ_JAABOQ010000004.1 Spongiivirga citrea strain KCTC 32990 Scaffold4_1, whole genome shotgun sequence 599,874
NZ_JAABOQ010000005.1 Spongiivirga citrea strain KCTC 32990 Scaffold5_1, whole genome shotgun sequence 587,799
NZ_JAABOQ010000006.1 Spongiivirga citrea strain KCTC 32990 Scaffold6_1, whole genome shotgun sequence 259,540
NZ_JAABOQ010000007.1 Spongiivirga citrea strain KCTC 32990 Scaffold7_1, whole genome shotgun sequence 227,242
NZ_JAABOQ010000008.1 Spongiivirga citrea strain KCTC 32990 Scaffold8_1, whole genome shotgun sequence 158,961
NZ_JAABOQ010000009.1 Spongiivirga citrea strain KCTC 32990 Scaffold9_1, whole genome shotgun sequence 101,625
NZ_JAABOQ010000010.1 Spongiivirga citrea strain KCTC 32990 Scaffold10_1, whole genome shotgun sequence 53,820
NZ_JAABOQ010000011.1 Spongiivirga citrea strain KCTC 32990 Scaffold11_1, whole genome shotgun sequence 20,078
NZ_JAABOQ010000012.1 Spongiivirga citrea strain KCTC 32990 Scaffold12_1, whole genome shotgun sequence 6,107
NZ_JAABOQ010000013.1 Spongiivirga citrea strain KCTC 32990 Scaffold13_1, whole genome shotgun sequence 5,000
NZ_JAABOQ010000014.1 Spongiivirga citrea strain KCTC 32990 Scaffold14_1, whole genome shotgun sequence 2,854
NZ_JAABOQ010000015.1 Spongiivirga citrea strain KCTC 32990 Scaffold15_1, whole genome shotgun sequence 1,484
NZ_JAABOQ010000016.1 Spongiivirga citrea strain KCTC 32990 Scaffold16_1, whole genome shotgun sequence 1,266
NZ_JAABOQ010000017.1 Spongiivirga citrea strain KCTC 32990 Scaffold17_1, whole genome shotgun sequence 692

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory