fast.genomicscompare 6,575 genera of bacteria & archaea

 

Tabrizicola_A oligotrophica KMS-5

Genome identifier: GCF_011008935.1

NCBI assembly name: ASM1100893v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Rhodobacteraceae, Tabrizicola_A, Tabrizicola_A oligotrophica

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Paracoccaceae, Tabrizicola, Tabrizicola oligotrophica

Scaffolds: 62

Genes: 3,762 Protein-coding: 3,666 RNAs: 52 pseudogenes: 44

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_JAAIVJ010000001.1 Tabrizicola oligotrophica strain KMS-5 contig00001, whole genome shotgun sequence 848,303
NZ_JAAIVJ010000002.1 Tabrizicola oligotrophica strain KMS-5 contig00002, whole genome shotgun sequence 490,774
NZ_JAAIVJ010000003.1 Tabrizicola oligotrophica strain KMS-5 contig00003, whole genome shotgun sequence 436,546
NZ_JAAIVJ010000004.1 Tabrizicola oligotrophica strain KMS-5 contig00004, whole genome shotgun sequence 252,520
NZ_JAAIVJ010000005.1 Tabrizicola oligotrophica strain KMS-5 contig00005, whole genome shotgun sequence 243,549
NZ_JAAIVJ010000006.1 Tabrizicola oligotrophica strain KMS-5 contig00006, whole genome shotgun sequence 232,626
NZ_JAAIVJ010000007.1 Tabrizicola oligotrophica strain KMS-5 contig00007, whole genome shotgun sequence 192,290
NZ_JAAIVJ010000008.1 Tabrizicola oligotrophica strain KMS-5 contig00008, whole genome shotgun sequence 188,342
NZ_JAAIVJ010000009.1 Tabrizicola oligotrophica strain KMS-5 contig00009, whole genome shotgun sequence 150,624
NZ_JAAIVJ010000010.1 Tabrizicola oligotrophica strain KMS-5 contig00010, whole genome shotgun sequence 71,672
NZ_JAAIVJ010000011.1 Tabrizicola oligotrophica strain KMS-5 contig00011, whole genome shotgun sequence 66,204
NZ_JAAIVJ010000012.1 Tabrizicola oligotrophica strain KMS-5 contig00012, whole genome shotgun sequence 64,529
NZ_JAAIVJ010000013.1 Tabrizicola oligotrophica strain KMS-5 contig00013, whole genome shotgun sequence 60,477
NZ_JAAIVJ010000014.1 Tabrizicola oligotrophica strain KMS-5 contig00014, whole genome shotgun sequence 58,214
NZ_JAAIVJ010000015.1 Tabrizicola oligotrophica strain KMS-5 contig00015, whole genome shotgun sequence 57,832
NZ_JAAIVJ010000016.1 Tabrizicola oligotrophica strain KMS-5 contig00016, whole genome shotgun sequence 56,331
NZ_JAAIVJ010000017.1 Tabrizicola oligotrophica strain KMS-5 contig00017, whole genome shotgun sequence 55,572
NZ_JAAIVJ010000018.1 Tabrizicola oligotrophica strain KMS-5 contig00018, whole genome shotgun sequence 51,679
NZ_JAAIVJ010000019.1 Tabrizicola oligotrophica strain KMS-5 contig00019, whole genome shotgun sequence 41,815
NZ_JAAIVJ010000020.1 Tabrizicola oligotrophica strain KMS-5 contig00020, whole genome shotgun sequence 34,250
NZ_JAAIVJ010000021.1 Tabrizicola oligotrophica strain KMS-5 contig00021, whole genome shotgun sequence 29,744
NZ_JAAIVJ010000022.1 Tabrizicola oligotrophica strain KMS-5 contig00022, whole genome shotgun sequence 23,106
NZ_JAAIVJ010000023.1 Tabrizicola oligotrophica strain KMS-5 contig00023, whole genome shotgun sequence 22,319
NZ_JAAIVJ010000024.1 Tabrizicola oligotrophica strain KMS-5 contig00024, whole genome shotgun sequence 19,947
NZ_JAAIVJ010000025.1 Tabrizicola oligotrophica strain KMS-5 contig00025, whole genome shotgun sequence 18,699
NZ_JAAIVJ010000026.1 Tabrizicola oligotrophica strain KMS-5 contig00026, whole genome shotgun sequence 16,061
NZ_JAAIVJ010000027.1 Tabrizicola oligotrophica strain KMS-5 contig00027, whole genome shotgun sequence 14,550
NZ_JAAIVJ010000028.1 Tabrizicola oligotrophica strain KMS-5 contig00028, whole genome shotgun sequence 13,664
NZ_JAAIVJ010000029.1 Tabrizicola oligotrophica strain KMS-5 contig00029, whole genome shotgun sequence 8,255
NZ_JAAIVJ010000030.1 Tabrizicola oligotrophica strain KMS-5 contig00030, whole genome shotgun sequence 5,647
NZ_JAAIVJ010000031.1 Tabrizicola oligotrophica strain KMS-5 contig00031, whole genome shotgun sequence 2,982
NZ_JAAIVJ010000032.1 Tabrizicola oligotrophica strain KMS-5 contig00032, whole genome shotgun sequence 2,415
NZ_JAAIVJ010000033.1 Tabrizicola oligotrophica strain KMS-5 contig00033, whole genome shotgun sequence 2,337
NZ_JAAIVJ010000034.1 Tabrizicola oligotrophica strain KMS-5 contig00034, whole genome shotgun sequence 1,633
NZ_JAAIVJ010000035.1 Tabrizicola oligotrophica strain KMS-5 contig00035, whole genome shotgun sequence 1,409
NZ_JAAIVJ010000036.1 Tabrizicola oligotrophica strain KMS-5 contig00036, whole genome shotgun sequence 1,229
NZ_JAAIVJ010000037.1 Tabrizicola oligotrophica strain KMS-5 contig00037, whole genome shotgun sequence 1,164
NZ_JAAIVJ010000038.1 Tabrizicola oligotrophica strain KMS-5 contig00038, whole genome shotgun sequence 885
NZ_JAAIVJ010000039.1 Tabrizicola oligotrophica strain KMS-5 contig00039, whole genome shotgun sequence 874
NZ_JAAIVJ010000040.1 Tabrizicola oligotrophica strain KMS-5 contig00040, whole genome shotgun sequence 805
NZ_JAAIVJ010000041.1 Tabrizicola oligotrophica strain KMS-5 contig00041, whole genome shotgun sequence 765
NZ_JAAIVJ010000042.1 Tabrizicola oligotrophica strain KMS-5 contig00042, whole genome shotgun sequence 678
NZ_JAAIVJ010000043.1 Tabrizicola oligotrophica strain KMS-5 contig00043, whole genome shotgun sequence 662
NZ_JAAIVJ010000044.1 Tabrizicola oligotrophica strain KMS-5 contig00044, whole genome shotgun sequence 638
NZ_JAAIVJ010000045.1 Tabrizicola oligotrophica strain KMS-5 contig00045, whole genome shotgun sequence 562
NZ_JAAIVJ010000046.1 Tabrizicola oligotrophica strain KMS-5 contig00046, whole genome shotgun sequence 548
NZ_JAAIVJ010000047.1 Tabrizicola oligotrophica strain KMS-5 contig00047, whole genome shotgun sequence 491
NZ_JAAIVJ010000048.1 Tabrizicola oligotrophica strain KMS-5 contig00048, whole genome shotgun sequence 484
NZ_JAAIVJ010000049.1 Tabrizicola oligotrophica strain KMS-5 contig00049, whole genome shotgun sequence 342
NZ_JAAIVJ010000050.1 Tabrizicola oligotrophica strain KMS-5 contig00050, whole genome shotgun sequence 338
NZ_JAAIVJ010000051.1 Tabrizicola oligotrophica strain KMS-5 contig00051, whole genome shotgun sequence 316
NZ_JAAIVJ010000052.1 Tabrizicola oligotrophica strain KMS-5 contig00052, whole genome shotgun sequence 283
NZ_JAAIVJ010000053.1 Tabrizicola oligotrophica strain KMS-5 contig00053, whole genome shotgun sequence 271
NZ_JAAIVJ010000054.1 Tabrizicola oligotrophica strain KMS-5 contig00054, whole genome shotgun sequence 254
NZ_JAAIVJ010000055.1 Tabrizicola oligotrophica strain KMS-5 contig00055, whole genome shotgun sequence 253
NZ_JAAIVJ010000056.1 Tabrizicola oligotrophica strain KMS-5 contig00056, whole genome shotgun sequence 253
NZ_JAAIVJ010000057.1 Tabrizicola oligotrophica strain KMS-5 contig00057, whole genome shotgun sequence 252
NZ_JAAIVJ010000058.1 Tabrizicola oligotrophica strain KMS-5 contig00058, whole genome shotgun sequence 251
NZ_JAAIVJ010000059.1 Tabrizicola oligotrophica strain KMS-5 contig00059, whole genome shotgun sequence 250
NZ_JAAIVJ010000060.1 Tabrizicola oligotrophica strain KMS-5 contig00060, whole genome shotgun sequence 249
NZ_JAAIVJ010000061.1 Tabrizicola oligotrophica strain KMS-5 contig00061, whole genome shotgun sequence 234
NZ_JAAIVJ010000062.1 Tabrizicola oligotrophica strain KMS-5 contig00062, whole genome shotgun sequence 228

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory