fast.genomicscompare 6,575 genera of bacteria & archaea

 

Halalkalibaculum roseum YR4-1

Genome identifier: GCF_011059145.1

NCBI assembly name: ASM1105914v1

GTDB taxonomy: Bacteria, Bacteroidota, Rhodothermia, Balneolales, Balneolaceae, Halalkalibaculum, Halalkalibaculum roseum

NCBI taxonomy: Bacteria, Balneolota, Balneolia, Balneolales, Balneolaceae, Halalkalibaculum, Halalkalibaculum roseum

Scaffolds: 21

Genes: 3,266 Protein-coding: 3,176 RNAs: 44 pseudogenes: 46

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_JAALLT010000001.1 Halalkalibaculum roseum strain YR4-1 Scaffold1, whole genome shotgun sequence 1,016,360
NZ_JAALLT010000002.1 Halalkalibaculum roseum strain YR4-1 Scaffold2, whole genome shotgun sequence 1,000,808
NZ_JAALLT010000003.1 Halalkalibaculum roseum strain YR4-1 Scaffold3, whole genome shotgun sequence 815,615
NZ_JAALLT010000004.1 Halalkalibaculum roseum strain YR4-1 Scaffold4, whole genome shotgun sequence 785,922
NZ_JAALLT010000005.1 Halalkalibaculum roseum strain YR4-1 Scaffold5, whole genome shotgun sequence 104,849
NZ_JAALLT010000006.1 Halalkalibaculum roseum strain YR4-1 Scaffold6, whole genome shotgun sequence 53,598
NZ_JAALLT010000007.1 Halalkalibaculum roseum strain YR4-1 Scaffold7, whole genome shotgun sequence 20,408
NZ_JAALLT010000008.1 Halalkalibaculum roseum strain YR4-1 Scaffold8, whole genome shotgun sequence 15,247
NZ_JAALLT010000009.1 Halalkalibaculum roseum strain YR4-1 Scaffold9, whole genome shotgun sequence 3,522
NZ_JAALLT010000010.1 Halalkalibaculum roseum strain YR4-1 Scaffold10, whole genome shotgun sequence 2,766
NZ_JAALLT010000011.1 Halalkalibaculum roseum strain YR4-1 Scaffold11, whole genome shotgun sequence 2,565
NZ_JAALLT010000012.1 Halalkalibaculum roseum strain YR4-1 Scaffold12, whole genome shotgun sequence 1,880
NZ_JAALLT010000013.1 Halalkalibaculum roseum strain YR4-1 Scaffold13, whole genome shotgun sequence 1,700
NZ_JAALLT010000014.1 Halalkalibaculum roseum strain YR4-1 Scaffold14, whole genome shotgun sequence 1,579
NZ_JAALLT010000015.1 Halalkalibaculum roseum strain YR4-1 Scaffold15, whole genome shotgun sequence 1,553
NZ_JAALLT010000016.1 Halalkalibaculum roseum strain YR4-1 Scaffold16, whole genome shotgun sequence 1,122
NZ_JAALLT010000017.1 Halalkalibaculum roseum strain YR4-1 Scaffold19, whole genome shotgun sequence 479
NZ_JAALLT010000018.1 Halalkalibaculum roseum strain YR4-1 Scaffold20, whole genome shotgun sequence 479
NZ_JAALLT010000019.1 Halalkalibaculum roseum strain YR4-1 Scaffold21, whole genome shotgun sequence 443
NZ_JAALLT010000020.1 Halalkalibaculum roseum strain YR4-1 Scaffold22, whole genome shotgun sequence 373
NZ_JAALLT010000021.1 Halalkalibaculum roseum strain YR4-1 Scaffold23, whole genome shotgun sequence 355

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory