fast.genomicscompare 6,575 genera of bacteria & archaea

 

Lactococcus_A insecticola Hs20B0-1

Genome identifier: GCF_011170065.1

NCBI assembly name: ASM1117006v1

GTDB taxonomy: Bacteria, Bacillota, Bacilli, Lactobacillales, Streptococcaceae, Lactococcus_A, Lactococcus_A insecticola

NCBI taxonomy: Bacteria, Bacillota, Bacilli, Lactobacillales, Streptococcaceae, Lactococcus, Lactococcus insecticola

Scaffolds: 28

Genes: 1,927 Protein-coding: 1,854 RNAs: 60 pseudogenes: 13

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_BLLH01000001.1 Lactococcus insecticola strain Hs20B0-1 sequence01, whole genome shotgun sequence 437,291
NZ_BLLH01000002.1 Lactococcus insecticola strain Hs20B0-1 sequence02, whole genome shotgun sequence 342,246
NZ_BLLH01000003.1 Lactococcus insecticola strain Hs20B0-1 sequence03, whole genome shotgun sequence 174,521
NZ_BLLH01000004.1 Lactococcus insecticola strain Hs20B0-1 sequence04, whole genome shotgun sequence 142,093
NZ_BLLH01000005.1 Lactococcus insecticola strain Hs20B0-1 sequence05, whole genome shotgun sequence 135,394
NZ_BLLH01000006.1 Lactococcus insecticola strain Hs20B0-1 sequence06, whole genome shotgun sequence 109,342
NZ_BLLH01000007.1 Lactococcus insecticola strain Hs20B0-1 sequence07, whole genome shotgun sequence 107,100
NZ_BLLH01000008.1 Lactococcus insecticola strain Hs20B0-1 sequence08, whole genome shotgun sequence 101,117
NZ_BLLH01000009.1 Lactococcus insecticola strain Hs20B0-1 sequence09, whole genome shotgun sequence 99,593
NZ_BLLH01000010.1 Lactococcus insecticola strain Hs20B0-1 sequence10, whole genome shotgun sequence 93,727
NZ_BLLH01000011.1 Lactococcus insecticola strain Hs20B0-1 sequence11, whole genome shotgun sequence 88,988
NZ_BLLH01000012.1 Lactococcus insecticola strain Hs20B0-1 sequence12, whole genome shotgun sequence 47,942
NZ_BLLH01000013.1 Lactococcus insecticola strain Hs20B0-1 sequence13, whole genome shotgun sequence 31,126
NZ_BLLH01000014.1 Lactococcus insecticola strain Hs20B0-1 sequence14, whole genome shotgun sequence 19,061
NZ_BLLH01000015.1 Lactococcus insecticola strain Hs20B0-1 sequence15, whole genome shotgun sequence 14,329
NZ_BLLH01000016.1 Lactococcus insecticola strain Hs20B0-1 sequence16, whole genome shotgun sequence 13,169
NZ_BLLH01000017.1 Lactococcus insecticola strain Hs20B0-1 sequence17, whole genome shotgun sequence 5,323
NZ_BLLH01000018.1 Lactococcus insecticola strain Hs20B0-1 sequence18, whole genome shotgun sequence 4,825
NZ_BLLH01000019.1 Lactococcus insecticola strain Hs20B0-1 sequence19, whole genome shotgun sequence 1,697
NZ_BLLH01000020.1 Lactococcus insecticola strain Hs20B0-1 sequence20, whole genome shotgun sequence 1,681
NZ_BLLH01000021.1 Lactococcus insecticola strain Hs20B0-1 sequence21, whole genome shotgun sequence 1,622
NZ_BLLH01000022.1 Lactococcus insecticola strain Hs20B0-1 sequence22, whole genome shotgun sequence 1,613
NZ_BLLH01000023.1 Lactococcus insecticola strain Hs20B0-1 sequence23, whole genome shotgun sequence 1,602
NZ_BLLH01000024.1 Lactococcus insecticola strain Hs20B0-1 sequence24, whole genome shotgun sequence 1,407
NZ_BLLH01000025.1 Lactococcus insecticola strain Hs20B0-1 sequence25, whole genome shotgun sequence 1,022
NZ_BLLH01000026.1 Lactococcus insecticola strain Hs20B0-1 sequence26, whole genome shotgun sequence 600
NZ_BLLH01000027.1 Lactococcus insecticola strain Hs20B0-1 sequence27, whole genome shotgun sequence 518
NZ_BLLH01000028.1 Lactococcus insecticola strain Hs20B0-1 sequence28, whole genome shotgun sequence 503

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory