fast.genomicscompare 6,575 genera of bacteria & archaea

 

Cochlodiniinecator piscidefendens M26A2M

Genome identifier: GCF_011326755.1

NCBI assembly name: ASM1132675v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Rhodobacteraceae, Cochlodiniinecator, Cochlodiniinecator piscidefendens

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Paracoccaceae, Cochlodiniinecator, Cochlodiniinecator piscidefendens

Scaffolds: 21

Genes: 3,664 Protein-coding: 3,572 RNAs: 48 pseudogenes: 44

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_JAAOIE010000001.1 Cochlodiniinecator piscidefendens strain M26A2M contig1, whole genome shotgun sequence 948,848
NZ_JAAOIE010000002.1 Cochlodiniinecator piscidefendens strain M26A2M contig2, whole genome shotgun sequence 832,068
NZ_JAAOIE010000003.1 Cochlodiniinecator piscidefendens strain M26A2M contig3, whole genome shotgun sequence 536,218
NZ_JAAOIE010000004.1 Cochlodiniinecator piscidefendens strain M26A2M contig4, whole genome shotgun sequence 363,368
NZ_JAAOIE010000005.1 Cochlodiniinecator piscidefendens strain M26A2M contig5, whole genome shotgun sequence 233,654
NZ_JAAOIE010000006.1 Cochlodiniinecator piscidefendens strain M26A2M contig6, whole genome shotgun sequence 147,442
NZ_JAAOIE010000007.1 Cochlodiniinecator piscidefendens strain M26A2M contig7, whole genome shotgun sequence 128,559
NZ_JAAOIE010000008.1 Cochlodiniinecator piscidefendens strain M26A2M contig8, whole genome shotgun sequence 105,651
NZ_JAAOIE010000009.1 Cochlodiniinecator piscidefendens strain M26A2M contig9, whole genome shotgun sequence 97,757
NZ_JAAOIE010000010.1 Cochlodiniinecator piscidefendens strain M26A2M contig10, whole genome shotgun sequence 89,910
NZ_JAAOIE010000011.1 Cochlodiniinecator piscidefendens strain M26A2M contig11, whole genome shotgun sequence 62,883
NZ_JAAOIE010000012.1 Cochlodiniinecator piscidefendens strain M26A2M contig12, whole genome shotgun sequence 61,555
NZ_JAAOIE010000013.1 Cochlodiniinecator piscidefendens strain M26A2M contig13, whole genome shotgun sequence 42,537
NZ_JAAOIE010000014.1 Cochlodiniinecator piscidefendens strain M26A2M contig14, whole genome shotgun sequence 20,781
NZ_JAAOIE010000015.1 Cochlodiniinecator piscidefendens strain M26A2M contig15, whole genome shotgun sequence 9,778
NZ_JAAOIE010000016.1 Cochlodiniinecator piscidefendens strain M26A2M contig16, whole genome shotgun sequence 6,993
NZ_JAAOIE010000017.1 Cochlodiniinecator piscidefendens strain M26A2M contig17, whole genome shotgun sequence 6,537
NZ_JAAOIE010000018.1 Cochlodiniinecator piscidefendens strain M26A2M contig18, whole genome shotgun sequence 3,413
NZ_JAAOIE010000019.1 Cochlodiniinecator piscidefendens strain M26A2M contig19, whole genome shotgun sequence 1,646
NZ_JAAOIE010000020.1 Cochlodiniinecator piscidefendens strain M26A2M contig20, whole genome shotgun sequence 1,375
NZ_JAAOIE010000021.1 Cochlodiniinecator piscidefendens strain M26A2M contig21, whole genome shotgun sequence 1,248

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory