fast.genomicscompare 6,575 genera of bacteria & archaea

 

Pelagibius litoralis DSM 21314

Genome identifier: GCF_011683915.1

NCBI assembly name: ASM1168391v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Kiloniellales, Kiloniellaceae, Pelagibius, Pelagibius litoralis

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Hyphomicrobiales, Rhodovibrionaceae, Pelagibius, Pelagibius litoralis

Scaffolds: 64

Genes: 5,709 Protein-coding: 5,596 RNAs: 54 pseudogenes: 59

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_JAAQPH010000001.1 Pelagibius litoralis strain DSM 21314 Scaffold1_1, whole genome shotgun sequence 440,563
NZ_JAAQPH010000002.1 Pelagibius litoralis strain DSM 21314 Scaffold2_1, whole genome shotgun sequence 424,748
NZ_JAAQPH010000003.1 Pelagibius litoralis strain DSM 21314 Scaffold3_1, whole genome shotgun sequence 348,736
NZ_JAAQPH010000004.1 Pelagibius litoralis strain DSM 21314 Scaffold4_1, whole genome shotgun sequence 334,248
NZ_JAAQPH010000005.1 Pelagibius litoralis strain DSM 21314 Scaffold5_1, whole genome shotgun sequence 319,689
NZ_JAAQPH010000006.1 Pelagibius litoralis strain DSM 21314 Scaffold6_1, whole genome shotgun sequence 294,626
NZ_JAAQPH010000007.1 Pelagibius litoralis strain DSM 21314 Scaffold7_1, whole genome shotgun sequence 239,296
NZ_JAAQPH010000008.1 Pelagibius litoralis strain DSM 21314 Scaffold8_1, whole genome shotgun sequence 236,166
NZ_JAAQPH010000009.1 Pelagibius litoralis strain DSM 21314 Scaffold9_1, whole genome shotgun sequence 235,145
NZ_JAAQPH010000010.1 Pelagibius litoralis strain DSM 21314 Scaffold10_1, whole genome shotgun sequence 229,969
NZ_JAAQPH010000011.1 Pelagibius litoralis strain DSM 21314 Scaffold11_1, whole genome shotgun sequence 215,352
NZ_JAAQPH010000012.1 Pelagibius litoralis strain DSM 21314 Scaffold12_1, whole genome shotgun sequence 197,355
NZ_JAAQPH010000013.1 Pelagibius litoralis strain DSM 21314 Scaffold13_1, whole genome shotgun sequence 194,012
NZ_JAAQPH010000014.1 Pelagibius litoralis strain DSM 21314 Scaffold14_1, whole genome shotgun sequence 183,251
NZ_JAAQPH010000015.1 Pelagibius litoralis strain DSM 21314 Scaffold15_1, whole genome shotgun sequence 177,506
NZ_JAAQPH010000016.1 Pelagibius litoralis strain DSM 21314 Scaffold16_1, whole genome shotgun sequence 147,473
NZ_JAAQPH010000017.1 Pelagibius litoralis strain DSM 21314 Scaffold17_1, whole genome shotgun sequence 141,319
NZ_JAAQPH010000018.1 Pelagibius litoralis strain DSM 21314 Scaffold18_1, whole genome shotgun sequence 115,752
NZ_JAAQPH010000019.1 Pelagibius litoralis strain DSM 21314 Scaffold19_1, whole genome shotgun sequence 104,785
NZ_JAAQPH010000020.1 Pelagibius litoralis strain DSM 21314 Scaffold20_1, whole genome shotgun sequence 103,733
NZ_JAAQPH010000021.1 Pelagibius litoralis strain DSM 21314 Scaffold21_1, whole genome shotgun sequence 102,762
NZ_JAAQPH010000022.1 Pelagibius litoralis strain DSM 21314 Scaffold22_1, whole genome shotgun sequence 98,212
NZ_JAAQPH010000023.1 Pelagibius litoralis strain DSM 21314 Scaffold23_1, whole genome shotgun sequence 94,387
NZ_JAAQPH010000024.1 Pelagibius litoralis strain DSM 21314 Scaffold24_1, whole genome shotgun sequence 91,593
NZ_JAAQPH010000025.1 Pelagibius litoralis strain DSM 21314 Scaffold25_1, whole genome shotgun sequence 89,672
NZ_JAAQPH010000026.1 Pelagibius litoralis strain DSM 21314 Scaffold26_1, whole genome shotgun sequence 79,872
NZ_JAAQPH010000027.1 Pelagibius litoralis strain DSM 21314 Scaffold27_1, whole genome shotgun sequence 70,399
NZ_JAAQPH010000028.1 Pelagibius litoralis strain DSM 21314 Scaffold28_1, whole genome shotgun sequence 65,965
NZ_JAAQPH010000029.1 Pelagibius litoralis strain DSM 21314 Scaffold29_1, whole genome shotgun sequence 56,284
NZ_JAAQPH010000030.1 Pelagibius litoralis strain DSM 21314 Scaffold30_1, whole genome shotgun sequence 50,238
NZ_JAAQPH010000031.1 Pelagibius litoralis strain DSM 21314 Scaffold31_1, whole genome shotgun sequence 48,874
NZ_JAAQPH010000032.1 Pelagibius litoralis strain DSM 21314 Scaffold32_1, whole genome shotgun sequence 44,372
NZ_JAAQPH010000033.1 Pelagibius litoralis strain DSM 21314 Scaffold33_1, whole genome shotgun sequence 40,715
NZ_JAAQPH010000034.1 Pelagibius litoralis strain DSM 21314 Scaffold34_1, whole genome shotgun sequence 39,674
NZ_JAAQPH010000035.1 Pelagibius litoralis strain DSM 21314 Scaffold35_1, whole genome shotgun sequence 34,377
NZ_JAAQPH010000036.1 Pelagibius litoralis strain DSM 21314 Scaffold36_1, whole genome shotgun sequence 32,832
NZ_JAAQPH010000037.1 Pelagibius litoralis strain DSM 21314 Scaffold37_1, whole genome shotgun sequence 30,312
NZ_JAAQPH010000038.1 Pelagibius litoralis strain DSM 21314 Scaffold38_1, whole genome shotgun sequence 24,402
NZ_JAAQPH010000039.1 Pelagibius litoralis strain DSM 21314 Scaffold39_1, whole genome shotgun sequence 23,634
NZ_JAAQPH010000040.1 Pelagibius litoralis strain DSM 21314 Scaffold40_1, whole genome shotgun sequence 21,972
NZ_JAAQPH010000041.1 Pelagibius litoralis strain DSM 21314 Scaffold41_1, whole genome shotgun sequence 20,377
NZ_JAAQPH010000042.1 Pelagibius litoralis strain DSM 21314 Scaffold42_1, whole genome shotgun sequence 18,487
NZ_JAAQPH010000043.1 Pelagibius litoralis strain DSM 21314 Scaffold43_1, whole genome shotgun sequence 18,260
NZ_JAAQPH010000044.1 Pelagibius litoralis strain DSM 21314 Scaffold44_1, whole genome shotgun sequence 18,090
NZ_JAAQPH010000045.1 Pelagibius litoralis strain DSM 21314 Scaffold45_1, whole genome shotgun sequence 17,671
NZ_JAAQPH010000046.1 Pelagibius litoralis strain DSM 21314 Scaffold46_1, whole genome shotgun sequence 16,125
NZ_JAAQPH010000047.1 Pelagibius litoralis strain DSM 21314 Scaffold47_1, whole genome shotgun sequence 15,286
NZ_JAAQPH010000048.1 Pelagibius litoralis strain DSM 21314 Scaffold48_1, whole genome shotgun sequence 15,007
NZ_JAAQPH010000049.1 Pelagibius litoralis strain DSM 21314 Scaffold49_1, whole genome shotgun sequence 14,225
NZ_JAAQPH010000050.1 Pelagibius litoralis strain DSM 21314 Scaffold50_1, whole genome shotgun sequence 8,146
NZ_JAAQPH010000051.1 Pelagibius litoralis strain DSM 21314 Scaffold51_1, whole genome shotgun sequence 7,978
NZ_JAAQPH010000052.1 Pelagibius litoralis strain DSM 21314 Scaffold52_1, whole genome shotgun sequence 7,730
NZ_JAAQPH010000053.1 Pelagibius litoralis strain DSM 21314 Scaffold53_1, whole genome shotgun sequence 7,109
NZ_JAAQPH010000054.1 Pelagibius litoralis strain DSM 21314 Scaffold54_1, whole genome shotgun sequence 5,928
NZ_JAAQPH010000055.1 Pelagibius litoralis strain DSM 21314 Scaffold55_1, whole genome shotgun sequence 3,813
NZ_JAAQPH010000056.1 Pelagibius litoralis strain DSM 21314 Scaffold56_1, whole genome shotgun sequence 2,050
NZ_JAAQPH010000057.1 Pelagibius litoralis strain DSM 21314 Scaffold57_1, whole genome shotgun sequence 1,277
NZ_JAAQPH010000058.1 Pelagibius litoralis strain DSM 21314 Scaffold58_1, whole genome shotgun sequence 1,268
NZ_JAAQPH010000059.1 Pelagibius litoralis strain DSM 21314 Scaffold59_1, whole genome shotgun sequence 1,187
NZ_JAAQPH010000060.1 Pelagibius litoralis strain DSM 21314 Scaffold60_1, whole genome shotgun sequence 1,100
NZ_JAAQPH010000061.1 Pelagibius litoralis strain DSM 21314 Scaffold61_1, whole genome shotgun sequence 735
NZ_JAAQPH010000062.1 Pelagibius litoralis strain DSM 21314 Scaffold62_1, whole genome shotgun sequence 713
NZ_JAAQPH010000063.1 Pelagibius litoralis strain DSM 21314 Scaffold63_1, whole genome shotgun sequence 677
NZ_JAAQPH010000064.1 Pelagibius litoralis strain DSM 21314 Scaffold64_1, whole genome shotgun sequence 617

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory