fast.genomicscompare 6,575 genera of bacteria & archaea

 

Saccharococcus thermophilus DSM 4749

Genome identifier: GCF_011761475.1

NCBI assembly name: ASM1176147v1

GTDB taxonomy: Bacteria, Bacillota, Bacilli, Bacillales, Anoxybacillaceae, Saccharococcus, Saccharococcus thermophilus

NCBI taxonomy: Bacteria, Bacillota, Bacilli, Bacillales, Bacillaceae, Saccharococcus, Saccharococcus thermophilus

Scaffolds: 3

Genes: 3,238 Protein-coding: 2,994 RNAs: 118 pseudogenes: 126

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_JAASRS010000001.1 Saccharococcus thermophilus strain DSM 4749 Ga0315738_01, whole genome shotgun sequence 3,063,264
NZ_JAASRS010000002.1 Saccharococcus thermophilus strain DSM 4749 Ga0315738_02, whole genome shotgun sequence 19,860
NZ_JAASRS010000003.1 Saccharococcus thermophilus strain DSM 4749 Ga0315738_03, whole genome shotgun sequence 62,017

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory