fast.genomicscompare 6,575 genera of bacteria & archaea

 

Rhizomicrobium palustre DSM 19867

Genome identifier: GCF_011761565.1

NCBI assembly name: ASM1176156v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Micropepsales, Micropepsaceae, Rhizomicrobium, Rhizomicrobium palustre

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Micropepsales, Micropepsaceae, Rhizomicrobium, Rhizomicrobium palustre

Scaffolds: 1

Genes: 3,840 Protein-coding: 3,769 RNAs: 58 pseudogenes: 13

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_JAASRM010000001.1 Rhizomicrobium palustre strain DSM 19867 Ga0373301_01, whole genome shotgun sequence 4,264,312

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory