fast.genomicscompare 6,575 genera of bacteria & archaea

 

Pseudochelatococcus lubricantis DSM 103870

Genome identifier: GCF_011762225.1

NCBI assembly name: ASM1176222v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhizobiales, Beijerinckiaceae, Pseudochelatococcus, Pseudochelatococcus lubricantis

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Hyphomicrobiales, Beijerinckiaceae, Pseudochelatococcus, Pseudochelatococcus lubricantis

Scaffolds: 29

Genes: 4,193 Protein-coding: 4,014 RNAs: 55 pseudogenes: 124

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_JAASQI010000001.1 Pseudochelatococcus lubricantis strain DSM 103870 Ga0373372_01, whole genome shotgun sequence 882,683
NZ_JAASQI010000002.1 Pseudochelatococcus lubricantis strain DSM 103870 Ga0373372_02, whole genome shotgun sequence 635,373
NZ_JAASQI010000003.1 Pseudochelatococcus lubricantis strain DSM 103870 Ga0373372_03, whole genome shotgun sequence 568,737
NZ_JAASQI010000004.1 Pseudochelatococcus lubricantis strain DSM 103870 Ga0373372_04, whole genome shotgun sequence 422,628
NZ_JAASQI010000005.1 Pseudochelatococcus lubricantis strain DSM 103870 Ga0373372_05, whole genome shotgun sequence 362,132
NZ_JAASQI010000006.1 Pseudochelatococcus lubricantis strain DSM 103870 Ga0373372_06, whole genome shotgun sequence 314,270
NZ_JAASQI010000007.1 Pseudochelatococcus lubricantis strain DSM 103870 Ga0373372_07, whole genome shotgun sequence 293,382
NZ_JAASQI010000008.1 Pseudochelatococcus lubricantis strain DSM 103870 Ga0373372_08, whole genome shotgun sequence 234,434
NZ_JAASQI010000009.1 Pseudochelatococcus lubricantis strain DSM 103870 Ga0373372_09, whole genome shotgun sequence 195,808
NZ_JAASQI010000010.1 Pseudochelatococcus lubricantis strain DSM 103870 Ga0373372_10, whole genome shotgun sequence 188,275
NZ_JAASQI010000011.1 Pseudochelatococcus lubricantis strain DSM 103870 Ga0373372_11, whole genome shotgun sequence 158,330
NZ_JAASQI010000012.1 Pseudochelatococcus lubricantis strain DSM 103870 Ga0373372_12, whole genome shotgun sequence 87,266
NZ_JAASQI010000013.1 Pseudochelatococcus lubricantis strain DSM 103870 Ga0373372_13, whole genome shotgun sequence 61,991
NZ_JAASQI010000014.1 Pseudochelatococcus lubricantis strain DSM 103870 Ga0373372_14, whole genome shotgun sequence 48,078
NZ_JAASQI010000015.1 Pseudochelatococcus lubricantis strain DSM 103870 Ga0373372_15, whole genome shotgun sequence 39,817
NZ_JAASQI010000016.1 Pseudochelatococcus lubricantis strain DSM 103870 Ga0373372_16, whole genome shotgun sequence 30,207
NZ_JAASQI010000017.1 Pseudochelatococcus lubricantis strain DSM 103870 Ga0373372_17, whole genome shotgun sequence 17,156
NZ_JAASQI010000018.1 Pseudochelatococcus lubricantis strain DSM 103870 Ga0373372_18, whole genome shotgun sequence 15,202
NZ_JAASQI010000019.1 Pseudochelatococcus lubricantis strain DSM 103870 Ga0373372_19, whole genome shotgun sequence 12,438
NZ_JAASQI010000020.1 Pseudochelatococcus lubricantis strain DSM 103870 Ga0373372_20, whole genome shotgun sequence 11,219
NZ_JAASQI010000021.1 Pseudochelatococcus lubricantis strain DSM 103870 Ga0373372_21, whole genome shotgun sequence 10,708
NZ_JAASQI010000022.1 Pseudochelatococcus lubricantis strain DSM 103870 Ga0373372_22, whole genome shotgun sequence 9,355
NZ_JAASQI010000023.1 Pseudochelatococcus lubricantis strain DSM 103870 Ga0373372_23, whole genome shotgun sequence 9,136
NZ_JAASQI010000024.1 Pseudochelatococcus lubricantis strain DSM 103870 Ga0373372_24, whole genome shotgun sequence 5,838
NZ_JAASQI010000025.1 Pseudochelatococcus lubricantis strain DSM 103870 Ga0373372_25, whole genome shotgun sequence 4,927
NZ_JAASQI010000026.1 Pseudochelatococcus lubricantis strain DSM 103870 Ga0373372_26, whole genome shotgun sequence 3,788
NZ_JAASQI010000027.1 Pseudochelatococcus lubricantis strain DSM 103870 Ga0373372_27, whole genome shotgun sequence 1,248
NZ_JAASQI010000028.1 Pseudochelatococcus lubricantis strain DSM 103870 Ga0373372_28, whole genome shotgun sequence 1,199
NZ_JAASQI010000029.1 Pseudochelatococcus lubricantis strain DSM 103870 Ga0373372_29, whole genome shotgun sequence 1,167

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory