fast.genomicscompare 6,575 genera of bacteria & archaea

 

Sphingomonas_K jejuensis DSM 27651

Genome identifier: GCF_011927695.1

NCBI assembly name: ASM1192769v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Sphingomonadales, Sphingomonadaceae, Sphingomonas_K, Sphingomonas_K jejuensis

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Sphingomonadales, Sphingomonadaceae, Sphingomonas, Sphingomonas jejuensis

Scaffolds: 10

Genes: 3,021 Protein-coding: 2,939 RNAs: 51 pseudogenes: 31

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_JAATJE010000001.1 Sphingomonas jejuensis strain DSM 27651 Ga0373247_01, whole genome shotgun sequence 1,878,747
NZ_JAATJE010000002.1 Sphingomonas jejuensis strain DSM 27651 Ga0373247_02, whole genome shotgun sequence 890,708
NZ_JAATJE010000003.1 Sphingomonas jejuensis strain DSM 27651 Ga0373247_03, whole genome shotgun sequence 83,950
NZ_JAATJE010000004.1 Sphingomonas jejuensis strain DSM 27651 Ga0373247_04, whole genome shotgun sequence 67,930
NZ_JAATJE010000005.1 Sphingomonas jejuensis strain DSM 27651 Ga0373247_05, whole genome shotgun sequence 21,395
NZ_JAATJE010000006.1 Sphingomonas jejuensis strain DSM 27651 Ga0373247_06, whole genome shotgun sequence 11,900
NZ_JAATJE010000007.1 Sphingomonas jejuensis strain DSM 27651 Ga0373247_07, whole genome shotgun sequence 2,563
NZ_JAATJE010000008.1 Sphingomonas jejuensis strain DSM 27651 Ga0373247_08, whole genome shotgun sequence 2,516
NZ_JAATJE010000009.1 Sphingomonas jejuensis strain DSM 27651 Ga0373247_09, whole genome shotgun sequence 1,406
NZ_JAATJE010000010.1 Sphingomonas jejuensis strain DSM 27651 Ga0373247_10, whole genome shotgun sequence 1,052

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory