fast.genomicscompare 6,575 genera of bacteria & archaea

 

Sneathiella chinensis LMG23452

Genome identifier: GCF_012720115.1

NCBI assembly name: ASM1272011v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Sneathiellales, Sneathiellaceae, Sneathiella, Sneathiella chinensis

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Sneathiellales, Sneathiellaceae, Sneathiella, Sneathiella chinensis

Scaffolds: 19

Genes: 3,321 Protein-coding: 3,264 RNAs: 50 pseudogenes: 7

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_VNWN01000001.1 Sneathiella chinensis strain LMG23452 contig1, whole genome shotgun sequence 1,687
NZ_VNWN01000002.1 Sneathiella chinensis strain LMG23452 contig2, whole genome shotgun sequence 1,373,931
NZ_VNWN01000003.1 Sneathiella chinensis strain LMG23452 contig3, whole genome shotgun sequence 42,986
NZ_VNWN01000004.1 Sneathiella chinensis strain LMG23452 contig4, whole genome shotgun sequence 757,023
NZ_VNWN01000005.1 Sneathiella chinensis strain LMG23452 contig5, whole genome shotgun sequence 7,674
NZ_VNWN01000006.1 Sneathiella chinensis strain LMG23452 contig6, whole genome shotgun sequence 510,418
NZ_VNWN01000007.1 Sneathiella chinensis strain LMG23452 contig7, whole genome shotgun sequence 488,587
NZ_VNWN01000008.1 Sneathiella chinensis strain LMG23452 contig8, whole genome shotgun sequence 246,657
NZ_VNWN01000009.1 Sneathiella chinensis strain LMG23452 contig9, whole genome shotgun sequence 473
NZ_VNWN01000010.1 Sneathiella chinensis strain LMG23452 contig10, whole genome shotgun sequence 83,816
NZ_VNWN01000011.1 Sneathiella chinensis strain LMG23452 contig11, whole genome shotgun sequence 15,621
NZ_VNWN01000012.1 Sneathiella chinensis strain LMG23452 contig12, whole genome shotgun sequence 5,432
NZ_VNWN01000013.1 Sneathiella chinensis strain LMG23452 contig13, whole genome shotgun sequence 4,877
NZ_VNWN01000014.1 Sneathiella chinensis strain LMG23452 contig14, whole genome shotgun sequence 4,221
NZ_VNWN01000015.1 Sneathiella chinensis strain LMG23452 contig15, whole genome shotgun sequence 1,483
NZ_VNWN01000016.1 Sneathiella chinensis strain LMG23452 contig16, whole genome shotgun sequence 1,193
NZ_VNWN01000017.1 Sneathiella chinensis strain LMG23452 contig17, whole genome shotgun sequence 862
NZ_VNWN01000018.1 Sneathiella chinensis strain LMG23452 contig18, whole genome shotgun sequence 582
NZ_VNWN01000019.1 Sneathiella chinensis strain LMG23452 contig19, whole genome shotgun sequence 216

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory