fast.genomicscompare 6,575 genera of bacteria & archaea

 

Dissulfurirhabdus thermomarina SH388

Genome identifier: GCF_012979235.1

NCBI assembly name: ASM1297923v1

GTDB taxonomy: Bacteria, Desulfobacterota, Dissulfuribacteria, Dissulfuribacterales, Dissulfurirhabdaceae, Dissulfurirhabdus, Dissulfurirhabdus thermomarina

NCBI taxonomy: Bacteria, Deltaproteobacteria, Dissulfurirhabdaceae, Dissulfurirhabdus, Dissulfurirhabdus thermomarina

Scaffolds: 34

Genes: 2,336 Protein-coding: 2,156 RNAs: 54 pseudogenes: 126

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_JAATWC010000001.1 Dissulfurirhabdus thermomarina strain SH388 1, whole genome shotgun sequence 713,503
NZ_JAATWC010000002.1 Dissulfurirhabdus thermomarina strain SH388 2, whole genome shotgun sequence 294,162
NZ_JAATWC010000003.1 Dissulfurirhabdus thermomarina strain SH388 3, whole genome shotgun sequence 240,491
NZ_JAATWC010000004.1 Dissulfurirhabdus thermomarina strain SH388 4, whole genome shotgun sequence 234,957
NZ_JAATWC010000005.1 Dissulfurirhabdus thermomarina strain SH388 5, whole genome shotgun sequence 175,804
NZ_JAATWC010000006.1 Dissulfurirhabdus thermomarina strain SH388 6, whole genome shotgun sequence 128,740
NZ_JAATWC010000007.1 Dissulfurirhabdus thermomarina strain SH388 7, whole genome shotgun sequence 128,562
NZ_JAATWC010000008.1 Dissulfurirhabdus thermomarina strain SH388 8, whole genome shotgun sequence 120,788
NZ_JAATWC010000009.1 Dissulfurirhabdus thermomarina strain SH388 9, whole genome shotgun sequence 116,191
NZ_JAATWC010000010.1 Dissulfurirhabdus thermomarina strain SH388 10, whole genome shotgun sequence 105,930
NZ_JAATWC010000011.1 Dissulfurirhabdus thermomarina strain SH388 11, whole genome shotgun sequence 69,426
NZ_JAATWC010000012.1 Dissulfurirhabdus thermomarina strain SH388 12, whole genome shotgun sequence 66,857
NZ_JAATWC010000013.1 Dissulfurirhabdus thermomarina strain SH388 13, whole genome shotgun sequence 31,367
NZ_JAATWC010000014.1 Dissulfurirhabdus thermomarina strain SH388 14, whole genome shotgun sequence 14,145
NZ_JAATWC010000015.1 Dissulfurirhabdus thermomarina strain SH388 15, whole genome shotgun sequence 4,767
NZ_JAATWC010000016.1 Dissulfurirhabdus thermomarina strain SH388 16, whole genome shotgun sequence 2,680
NZ_JAATWC010000017.1 Dissulfurirhabdus thermomarina strain SH388 17, whole genome shotgun sequence 1,637
NZ_JAATWC010000018.1 Dissulfurirhabdus thermomarina strain SH388 18, whole genome shotgun sequence 1,483
NZ_JAATWC010000019.1 Dissulfurirhabdus thermomarina strain SH388 19, whole genome shotgun sequence 1,232
NZ_JAATWC010000020.1 Dissulfurirhabdus thermomarina strain SH388 20, whole genome shotgun sequence 1,215
NZ_JAATWC010000021.1 Dissulfurirhabdus thermomarina strain SH388 21, whole genome shotgun sequence 985
NZ_JAATWC010000022.1 Dissulfurirhabdus thermomarina strain SH388 22, whole genome shotgun sequence 847
NZ_JAATWC010000023.1 Dissulfurirhabdus thermomarina strain SH388 23, whole genome shotgun sequence 785
NZ_JAATWC010000024.1 Dissulfurirhabdus thermomarina strain SH388 24, whole genome shotgun sequence 704
NZ_JAATWC010000025.1 Dissulfurirhabdus thermomarina strain SH388 25, whole genome shotgun sequence 693
NZ_JAATWC010000026.1 Dissulfurirhabdus thermomarina strain SH388 26, whole genome shotgun sequence 680
NZ_JAATWC010000027.1 Dissulfurirhabdus thermomarina strain SH388 27, whole genome shotgun sequence 670
NZ_JAATWC010000028.1 Dissulfurirhabdus thermomarina strain SH388 28, whole genome shotgun sequence 512
NZ_JAATWC010000029.1 Dissulfurirhabdus thermomarina strain SH388 29, whole genome shotgun sequence 332
NZ_JAATWC010000030.1 Dissulfurirhabdus thermomarina strain SH388 30, whole genome shotgun sequence 276
NZ_JAATWC010000031.1 Dissulfurirhabdus thermomarina strain SH388 31, whole genome shotgun sequence 274
NZ_JAATWC010000032.1 Dissulfurirhabdus thermomarina strain SH388 32, whole genome shotgun sequence 226
NZ_JAATWC010000033.1 Dissulfurirhabdus thermomarina strain SH388 33, whole genome shotgun sequence 221
NZ_JAATWC010000034.1 Dissulfurirhabdus thermomarina strain SH388 34, whole genome shotgun sequence 207

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory