fast.genomicscompare 6,575 genera of bacteria & archaea

 

Alterinioella nitratireducens DY48A3-103

Genome identifier: GCF_013155465.1

NCBI assembly name: ASM1315546v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Rhodobacteraceae, Alterinioella, Alterinioella nitratireducens

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Paracoccaceae, Alterinioella, Alterinioella nitratireducens

Scaffolds: 45

Genes: 4,122 Protein-coding: 4,010 RNAs: 48 pseudogenes: 64

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_JABJVX010000001.1 Alterinioella nitratireducens strain DY48A3-103 NODE_1_length_616813_cov_223.247941, whole genome shotgun sequence 616,813
NZ_JABJVX010000002.1 Alterinioella nitratireducens strain DY48A3-103 NODE_2_length_510769_cov_271.398882, whole genome shotgun sequence 510,769
NZ_JABJVX010000003.1 Alterinioella nitratireducens strain DY48A3-103 NODE_3_length_407897_cov_215.617780, whole genome shotgun sequence 407,897
NZ_JABJVX010000004.1 Alterinioella nitratireducens strain DY48A3-103 NODE_4_length_392595_cov_244.547748, whole genome shotgun sequence 392,595
NZ_JABJVX010000005.1 Alterinioella nitratireducens strain DY48A3-103 NODE_5_length_263628_cov_247.321737, whole genome shotgun sequence 263,628
NZ_JABJVX010000006.1 Alterinioella nitratireducens strain DY48A3-103 NODE_6_length_254421_cov_249.521365, whole genome shotgun sequence 254,421
NZ_JABJVX010000007.1 Alterinioella nitratireducens strain DY48A3-103 NODE_7_length_234575_cov_251.966806, whole genome shotgun sequence 234,575
NZ_JABJVX010000008.1 Alterinioella nitratireducens strain DY48A3-103 NODE_8_length_218882_cov_244.117982, whole genome shotgun sequence 218,882
NZ_JABJVX010000009.1 Alterinioella nitratireducens strain DY48A3-103 NODE_9_length_116239_cov_234.844157, whole genome shotgun sequence 116,239
NZ_JABJVX010000010.1 Alterinioella nitratireducens strain DY48A3-103 NODE_10_length_104430_cov_225.307763, whole genome shotgun sequence 104,430
NZ_JABJVX010000011.1 Alterinioella nitratireducens strain DY48A3-103 NODE_11_length_100051_cov_429.519705, whole genome shotgun sequence 100,051
NZ_JABJVX010000012.1 Alterinioella nitratireducens strain DY48A3-103 NODE_12_length_96484_cov_232.349850, whole genome shotgun sequence 96,484
NZ_JABJVX010000013.1 Alterinioella nitratireducens strain DY48A3-103 NODE_13_length_93632_cov_214.034963, whole genome shotgun sequence 93,632
NZ_JABJVX010000014.1 Alterinioella nitratireducens strain DY48A3-103 NODE_14_length_63245_cov_227.689795, whole genome shotgun sequence 63,245
NZ_JABJVX010000015.1 Alterinioella nitratireducens strain DY48A3-103 NODE_15_length_62042_cov_261.949907, whole genome shotgun sequence 62,042
NZ_JABJVX010000016.1 Alterinioella nitratireducens strain DY48A3-103 NODE_16_length_56415_cov_1485.273829, whole genome shotgun sequence 56,415
NZ_JABJVX010000017.1 Alterinioella nitratireducens strain DY48A3-103 NODE_17_length_49621_cov_233.895386, whole genome shotgun sequence 49,621
NZ_JABJVX010000018.1 Alterinioella nitratireducens strain DY48A3-103 NODE_18_length_39301_cov_226.707959, whole genome shotgun sequence 39,301
NZ_JABJVX010000019.1 Alterinioella nitratireducens strain DY48A3-103 NODE_19_length_37505_cov_242.624052, whole genome shotgun sequence 37,505
NZ_JABJVX010000020.1 Alterinioella nitratireducens strain DY48A3-103 NODE_20_length_34916_cov_223.491145, whole genome shotgun sequence 34,916
NZ_JABJVX010000021.1 Alterinioella nitratireducens strain DY48A3-103 NODE_21_length_33879_cov_256.936394, whole genome shotgun sequence 33,879
NZ_JABJVX010000022.1 Alterinioella nitratireducens strain DY48A3-103 NODE_22_length_30861_cov_243.633056, whole genome shotgun sequence 30,861
NZ_JABJVX010000023.1 Alterinioella nitratireducens strain DY48A3-103 NODE_23_length_28506_cov_446.005663, whole genome shotgun sequence 28,506
NZ_JABJVX010000024.1 Alterinioella nitratireducens strain DY48A3-103 NODE_24_length_28086_cov_280.709950, whole genome shotgun sequence 28,086
NZ_JABJVX010000025.1 Alterinioella nitratireducens strain DY48A3-103 NODE_25_length_27817_cov_278.998738, whole genome shotgun sequence 27,817
NZ_JABJVX010000026.1 Alterinioella nitratireducens strain DY48A3-103 NODE_26_length_22354_cov_232.692239, whole genome shotgun sequence 22,354
NZ_JABJVX010000027.1 Alterinioella nitratireducens strain DY48A3-103 NODE_27_length_19742_cov_283.361963, whole genome shotgun sequence 19,742
NZ_JABJVX010000028.1 Alterinioella nitratireducens strain DY48A3-103 NODE_28_length_17507_cov_263.804991, whole genome shotgun sequence 17,507
NZ_JABJVX010000029.1 Alterinioella nitratireducens strain DY48A3-103 NODE_29_length_13464_cov_452.606036, whole genome shotgun sequence 13,464
NZ_JABJVX010000030.1 Alterinioella nitratireducens strain DY48A3-103 NODE_30_length_11240_cov_490.546627, whole genome shotgun sequence 11,240
NZ_JABJVX010000031.1 Alterinioella nitratireducens strain DY48A3-103 NODE_31_length_10929_cov_463.435404, whole genome shotgun sequence 10,929
NZ_JABJVX010000032.1 Alterinioella nitratireducens strain DY48A3-103 NODE_32_length_7019_cov_219.745462, whole genome shotgun sequence 7,019
NZ_JABJVX010000033.1 Alterinioella nitratireducens strain DY48A3-103 NODE_33_length_6977_cov_513.216522, whole genome shotgun sequence 6,977
NZ_JABJVX010000034.1 Alterinioella nitratireducens strain DY48A3-103 NODE_34_length_6376_cov_271.530243, whole genome shotgun sequence 6,376
NZ_JABJVX010000035.1 Alterinioella nitratireducens strain DY48A3-103 NODE_35_length_5861_cov_254.193983, whole genome shotgun sequence 5,861
NZ_JABJVX010000036.1 Alterinioella nitratireducens strain DY48A3-103 NODE_36_length_5821_cov_259.335829, whole genome shotgun sequence 5,821
NZ_JABJVX010000037.1 Alterinioella nitratireducens strain DY48A3-103 NODE_37_length_5693_cov_238.355057, whole genome shotgun sequence 5,693
NZ_JABJVX010000038.1 Alterinioella nitratireducens strain DY48A3-103 NODE_38_length_5611_cov_323.101915, whole genome shotgun sequence 5,611
NZ_JABJVX010000039.1 Alterinioella nitratireducens strain DY48A3-103 NODE_39_length_5407_cov_491.660976, whole genome shotgun sequence 5,407
NZ_JABJVX010000040.1 Alterinioella nitratireducens strain DY48A3-103 NODE_40_length_5294_cov_204.853172, whole genome shotgun sequence 5,294
NZ_JABJVX010000041.1 Alterinioella nitratireducens strain DY48A3-103 NODE_41_length_4947_cov_515.903696, whole genome shotgun sequence 4,947
NZ_JABJVX010000042.1 Alterinioella nitratireducens strain DY48A3-103 NODE_42_length_4875_cov_653.319717, whole genome shotgun sequence 4,875
NZ_JABJVX010000043.1 Alterinioella nitratireducens strain DY48A3-103 NODE_43_length_4288_cov_274.914747, whole genome shotgun sequence 4,288
NZ_JABJVX010000044.1 Alterinioella nitratireducens strain DY48A3-103 NODE_44_length_3371_cov_1114.612629, whole genome shotgun sequence 3,371
NZ_JABJVX010000045.1 Alterinioella nitratireducens strain DY48A3-103 NODE_45_length_2225_cov_1537.286778, whole genome shotgun sequence 2,225

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory