fast.genomicscompare 6,575 genera of bacteria & archaea

 

Lichenicola cladoniae PAMC 26569

Genome identifier: GCF_013201075.1

NCBI assembly name: ASM1320107v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Acetobacterales, Acetobacteraceae, Lichenicola, Lichenicola cladoniae

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodospirillales, Acetobacteraceae, Lichenicola, Lichenicola cladoniae

Scaffolds: 8

Genes: 5,685 Protein-coding: 5,416 RNAs: 63 pseudogenes: 206

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_CP053708.1 Lichenicola cladoniae strain PAMC 26569 chromosome, complete genome 4,799,761
NZ_CP053709.1 Lichenicola cladoniae strain PAMC 26569 plasmid unnamed1, complete sequence 441,110
NZ_CP053710.1 Lichenicola cladoniae strain PAMC 26569 plasmid unnamed2, complete sequence 354,209
NZ_CP053711.1 Lichenicola cladoniae strain PAMC 26569 plasmid unnamed4, complete sequence 214,302
NZ_CP053712.1 Lichenicola cladoniae strain PAMC 26569 plasmid unnamed5, complete sequence 149,789
NZ_CP053713.1 Lichenicola cladoniae strain PAMC 26569 plasmid unnamed6, complete sequence 43,488
NZ_CP053714.1 Lichenicola cladoniae strain PAMC 26569 plasmid unnamed7, complete sequence 29,845
NZ_CP053715.1 Lichenicola cladoniae strain PAMC 26569 plasmid unnamed8, complete sequence 28,800

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory