fast.genomicscompare 6,575 genera of bacteria & archaea

 

Macellibacteroides fermentans DSM 23697

Genome identifier: GCF_013409575.1

NCBI assembly name: ASM1340957v1

GTDB taxonomy: Bacteria, Bacteroidota, Bacteroidia, Bacteroidales, Tannerellaceae, Macellibacteroides, Macellibacteroides fermentans

NCBI taxonomy: Bacteria, Bacteroidota, Bacteroidia, Bacteroidales, Porphyromonadaceae, Macellibacteroides, Macellibacteroides fermentans

Scaffolds: 10

Genes: 3,289 Protein-coding: 3,146 RNAs: 90 pseudogenes: 53

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_JACCCY010000001.1 Macellibacteroides fermentans strain DSM 23697 Ga0376912_01, whole genome shotgun sequence 1,204,208
NZ_JACCCY010000002.1 Macellibacteroides fermentans strain DSM 23697 Ga0376912_02, whole genome shotgun sequence 1,059,669
NZ_JACCCY010000003.1 Macellibacteroides fermentans strain DSM 23697 Ga0376912_03, whole genome shotgun sequence 817,433
NZ_JACCCY010000004.1 Macellibacteroides fermentans strain DSM 23697 Ga0376912_04, whole genome shotgun sequence 369,900
NZ_JACCCY010000005.1 Macellibacteroides fermentans strain DSM 23697 Ga0376912_05, whole genome shotgun sequence 131,794
NZ_JACCCY010000006.1 Macellibacteroides fermentans strain DSM 23697 Ga0376912_06, whole genome shotgun sequence 133,207
NZ_JACCCY010000007.1 Macellibacteroides fermentans strain DSM 23697 Ga0376912_07, whole genome shotgun sequence 116,482
NZ_JACCCY010000008.1 Macellibacteroides fermentans strain DSM 23697 Ga0376912_08, whole genome shotgun sequence 55,681
NZ_JACCCY010000009.1 Macellibacteroides fermentans strain DSM 23697 Ga0376912_09, whole genome shotgun sequence 26,850
NZ_JACCCY010000010.1 Macellibacteroides fermentans strain DSM 23697 Ga0376912_10, whole genome shotgun sequence 20,761

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory