fast.genomicscompare 6,575 genera of bacteria & archaea

 

Sphingomonas_N chungangi CGMCC 1.13654

Genome identifier: GCF_013778325.1

NCBI assembly name: ASM1377832v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Sphingomonadales, Sphingomonadaceae, Sphingomonas_N, Sphingomonas_N chungangi

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Sphingomonadales, Sphingomonadaceae, Sphingomonas, Sphingomonas chungangi

Scaffolds: 27

Genes: 4,337 Protein-coding: 4,136 RNAs: 52 pseudogenes: 149

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_JACEIB010000001.1 Sphingomonas chungangi strain CGMCC 1.13654 soapdenovo_K_83_1, whole genome shotgun sequence 687,588
NZ_JACEIB010000002.1 Sphingomonas chungangi strain CGMCC 1.13654 soapdenovo_K_83_2, whole genome shotgun sequence 177,169
NZ_JACEIB010000003.1 Sphingomonas chungangi strain CGMCC 1.13654 soapdenovo_K_83_3, whole genome shotgun sequence 652,777
NZ_JACEIB010000004.1 Sphingomonas chungangi strain CGMCC 1.13654 soapdenovo_K_83_5, whole genome shotgun sequence 77,517
NZ_JACEIB010000005.1 Sphingomonas chungangi strain CGMCC 1.13654 soapdenovo_K_83_6, whole genome shotgun sequence 82,321
NZ_JACEIB010000006.1 Sphingomonas chungangi strain CGMCC 1.13654 soapdenovo_K_83_7, whole genome shotgun sequence 589,653
NZ_JACEIB010000007.1 Sphingomonas chungangi strain CGMCC 1.13654 soapdenovo_K_83_8, whole genome shotgun sequence 355,896
NZ_JACEIB010000008.1 Sphingomonas chungangi strain CGMCC 1.13654 soapdenovo_K_83_9, whole genome shotgun sequence 119,367
NZ_JACEIB010000009.1 Sphingomonas chungangi strain CGMCC 1.13654 soapdenovo_K_83_10, whole genome shotgun sequence 572
NZ_JACEIB010000010.1 Sphingomonas chungangi strain CGMCC 1.13654 soapdenovo_K_83_11, whole genome shotgun sequence 611
NZ_JACEIB010000011.1 Sphingomonas chungangi strain CGMCC 1.13654 soapdenovo_K_83_12, whole genome shotgun sequence 700
NZ_JACEIB010000012.1 Sphingomonas chungangi strain CGMCC 1.13654 soapdenovo_K_83_13, whole genome shotgun sequence 862
NZ_JACEIB010000013.1 Sphingomonas chungangi strain CGMCC 1.13654 soapdenovo_K_83_14, whole genome shotgun sequence 889
NZ_JACEIB010000014.1 Sphingomonas chungangi strain CGMCC 1.13654 soapdenovo_K_83_15, whole genome shotgun sequence 1,001
NZ_JACEIB010000015.1 Sphingomonas chungangi strain CGMCC 1.13654 soapdenovo_K_83_16, whole genome shotgun sequence 1,113
NZ_JACEIB010000016.1 Sphingomonas chungangi strain CGMCC 1.13654 soapdenovo_K_83_17, whole genome shotgun sequence 1,317
NZ_JACEIB010000017.1 Sphingomonas chungangi strain CGMCC 1.13654 soapdenovo_K_83_18, whole genome shotgun sequence 1,664
NZ_JACEIB010000018.1 Sphingomonas chungangi strain CGMCC 1.13654 soapdenovo_K_83_19, whole genome shotgun sequence 2,232
NZ_JACEIB010000019.1 Sphingomonas chungangi strain CGMCC 1.13654 soapdenovo_K_83_20, whole genome shotgun sequence 2,235
NZ_JACEIB010000020.1 Sphingomonas chungangi strain CGMCC 1.13654 soapdenovo_K_83_21, whole genome shotgun sequence 2,309
NZ_JACEIB010000021.1 Sphingomonas chungangi strain CGMCC 1.13654 soapdenovo_K_83_22, whole genome shotgun sequence 5,370
NZ_JACEIB010000022.1 Sphingomonas chungangi strain CGMCC 1.13654 soapdenovo_K_83_23, whole genome shotgun sequence 13,297
NZ_JACEIB010000023.1 Sphingomonas chungangi strain CGMCC 1.13654 soapdenovo_K_83_24, whole genome shotgun sequence 28,247
NZ_JACEIB010000024.1 Sphingomonas chungangi strain CGMCC 1.13654 soapdenovo_K_83_25, whole genome shotgun sequence 84,436
NZ_JACEIB010000025.1 Sphingomonas chungangi strain CGMCC 1.13654 soapdenovo_K_83_26, whole genome shotgun sequence 277,370
NZ_JACEIB010000026.1 Sphingomonas chungangi strain CGMCC 1.13654 soapdenovo_K_83_27, whole genome shotgun sequence 433,564
NZ_JACEIB010000027.1 Sphingomonas chungangi strain CGMCC 1.13654 soapdenovo_K_83_28, whole genome shotgun sequence 769,913

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory