fast.genomicscompare 6,575 genera of bacteria & archaea

 

Chthonobacter albigriseus KCTC 42450

Genome identifier: GCF_013839445.1

NCBI assembly name: ASM1383944v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhizobiales, Pleomorphomonadaceae, Chthonobacter, Chthonobacter albigriseus

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Hyphomicrobiales, Pleomorphomonadaceae, Chthonobacter, Chthonobacter albigriseus

Scaffolds: 20

Genes: 4,308 Protein-coding: 4,221 RNAs: 50 pseudogenes: 37

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_JACDIT010000001.1 Chthonobacter albigriseus strain KCTC 42450 Scaffold1, whole genome shotgun sequence 1,799,768
NZ_JACDIT010000002.1 Chthonobacter albigriseus strain KCTC 42450 Scaffold2, whole genome shotgun sequence 454,198
NZ_JACDIT010000003.1 Chthonobacter albigriseus strain KCTC 42450 Scaffold3, whole genome shotgun sequence 417,960
NZ_JACDIT010000004.1 Chthonobacter albigriseus strain KCTC 42450 Scaffold4, whole genome shotgun sequence 350,428
NZ_JACDIT010000005.1 Chthonobacter albigriseus strain KCTC 42450 Scaffold5, whole genome shotgun sequence 314,163
NZ_JACDIT010000006.1 Chthonobacter albigriseus strain KCTC 42450 Scaffold6, whole genome shotgun sequence 261,789
NZ_JACDIT010000007.1 Chthonobacter albigriseus strain KCTC 42450 Scaffold7, whole genome shotgun sequence 214,568
NZ_JACDIT010000008.1 Chthonobacter albigriseus strain KCTC 42450 Scaffold8, whole genome shotgun sequence 193,728
NZ_JACDIT010000009.1 Chthonobacter albigriseus strain KCTC 42450 Scaffold9, whole genome shotgun sequence 167,661
NZ_JACDIT010000010.1 Chthonobacter albigriseus strain KCTC 42450 Scaffold10, whole genome shotgun sequence 140,301
NZ_JACDIT010000011.1 Chthonobacter albigriseus strain KCTC 42450 Scaffold11, whole genome shotgun sequence 105,445
NZ_JACDIT010000012.1 Chthonobacter albigriseus strain KCTC 42450 Scaffold12, whole genome shotgun sequence 101,314
NZ_JACDIT010000013.1 Chthonobacter albigriseus strain KCTC 42450 Scaffold13, whole genome shotgun sequence 98,974
NZ_JACDIT010000014.1 Chthonobacter albigriseus strain KCTC 42450 Scaffold14, whole genome shotgun sequence 13,152
NZ_JACDIT010000015.1 Chthonobacter albigriseus strain KCTC 42450 Scaffold15, whole genome shotgun sequence 6,113
NZ_JACDIT010000016.1 Chthonobacter albigriseus strain KCTC 42450 Scaffold16, whole genome shotgun sequence 1,073
NZ_JACDIT010000017.1 Chthonobacter albigriseus strain KCTC 42450 Scaffold17, whole genome shotgun sequence 1,056
NZ_JACDIT010000018.1 Chthonobacter albigriseus strain KCTC 42450 Scaffold18, whole genome shotgun sequence 1,040
NZ_JACDIT010000019.1 Chthonobacter albigriseus strain KCTC 42450 Scaffold19, whole genome shotgun sequence 899
NZ_JACDIT010000020.1 Chthonobacter albigriseus strain KCTC 42450 Scaffold20, whole genome shotgun sequence 870

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory