fast.genomicscompare 6,575 genera of bacteria & archaea

 

HY038 sp014117425 HY038

Genome identifier: GCF_014117425.1

NCBI assembly name: ASM1411742v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhizobiales, Rhizobiaceae, HY038, HY038 sp014117425

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Hyphomicrobiales, Bartonellaceae, Bartonella

Scaffolds: 4

Genes: 3,114 Protein-coding: 2,971 RNAs: 79 pseudogenes: 64

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_CP059725.1 Bartonella sp. HY038 chromosome, complete genome 3,368,120
NZ_CP059726.1 Bartonella sp. HY038 plasmid unnamed1, complete sequence 200,943
NZ_CP059727.1 Bartonella sp. HY038 plasmid unnamed2, complete sequence 18,722
NZ_CP059728.1 Bartonella sp. HY038 plasmid unnamed3, complete sequence 14,987

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory