fast.genomicscompare 6,575 genera of bacteria & archaea

 

Lysobacter_H spongiae 119BY6-57

Genome identifier: GCF_014145325.1

NCBI assembly name: ASM1414532v1

GTDB taxonomy: Bacteria, Pseudomonadota, Gammaproteobacteria, Xanthomonadales, Xanthomonadaceae, Lysobacter_H, Lysobacter_H spongiae

NCBI taxonomy: Bacteria, Pseudomonadota, Gammaproteobacteria, Xanthomonadales, Xanthomonadaceae, Lysobacter, Lysobacter spongiae

Scaffolds: 54

Genes: 3,345 Protein-coding: 3,190 RNAs: 57 pseudogenes: 98

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_JACHTF010000001.1 Lysobacter spongiae strain 119BY6-57 NODE_1_length_340495_cov_73.700095, whole genome shotgun sequence 340,495
NZ_JACHTF010000002.1 Lysobacter spongiae strain 119BY6-57 NODE_2_length_339658_cov_40.085668, whole genome shotgun sequence 339,658
NZ_JACHTF010000003.1 Lysobacter spongiae strain 119BY6-57 NODE_3_length_292738_cov_57.478888, whole genome shotgun sequence 292,738
NZ_JACHTF010000004.1 Lysobacter spongiae strain 119BY6-57 NODE_4_length_213734_cov_90.164269, whole genome shotgun sequence 213,734
NZ_JACHTF010000005.1 Lysobacter spongiae strain 119BY6-57 NODE_5_length_206258_cov_61.562128, whole genome shotgun sequence 206,258
NZ_JACHTF010000006.1 Lysobacter spongiae strain 119BY6-57 NODE_6_length_202352_cov_53.418034, whole genome shotgun sequence 202,352
NZ_JACHTF010000007.1 Lysobacter spongiae strain 119BY6-57 NODE_7_length_183506_cov_40.031874, whole genome shotgun sequence 183,506
NZ_JACHTF010000008.1 Lysobacter spongiae strain 119BY6-57 NODE_8_length_172446_cov_51.142875, whole genome shotgun sequence 172,446
NZ_JACHTF010000009.1 Lysobacter spongiae strain 119BY6-57 NODE_9_length_171825_cov_88.370767, whole genome shotgun sequence 171,825
NZ_JACHTF010000010.1 Lysobacter spongiae strain 119BY6-57 NODE_10_length_164191_cov_51.430588, whole genome shotgun sequence 164,191
NZ_JACHTF010000011.1 Lysobacter spongiae strain 119BY6-57 NODE_11_length_136555_cov_45.356628, whole genome shotgun sequence 136,555
NZ_JACHTF010000012.1 Lysobacter spongiae strain 119BY6-57 NODE_12_length_118677_cov_90.731497, whole genome shotgun sequence 118,677
NZ_JACHTF010000013.1 Lysobacter spongiae strain 119BY6-57 NODE_13_length_107327_cov_94.904226, whole genome shotgun sequence 107,327
NZ_JACHTF010000014.1 Lysobacter spongiae strain 119BY6-57 NODE_14_length_103788_cov_51.203201, whole genome shotgun sequence 103,788
NZ_JACHTF010000015.1 Lysobacter spongiae strain 119BY6-57 NODE_15_length_103650_cov_88.202873, whole genome shotgun sequence 103,650
NZ_JACHTF010000016.1 Lysobacter spongiae strain 119BY6-57 NODE_16_length_101201_cov_86.507341, whole genome shotgun sequence 101,201
NZ_JACHTF010000017.1 Lysobacter spongiae strain 119BY6-57 NODE_17_length_97910_cov_71.161950, whole genome shotgun sequence 97,910
NZ_JACHTF010000018.1 Lysobacter spongiae strain 119BY6-57 NODE_18_length_92746_cov_92.247671, whole genome shotgun sequence 92,746
NZ_JACHTF010000019.1 Lysobacter spongiae strain 119BY6-57 NODE_19_length_81946_cov_46.846564, whole genome shotgun sequence 81,946
NZ_JACHTF010000020.1 Lysobacter spongiae strain 119BY6-57 NODE_20_length_73956_cov_45.228921, whole genome shotgun sequence 73,956
NZ_JACHTF010000021.1 Lysobacter spongiae strain 119BY6-57 NODE_21_length_62370_cov_87.834520, whole genome shotgun sequence 62,370
NZ_JACHTF010000022.1 Lysobacter spongiae strain 119BY6-57 NODE_22_length_60565_cov_100.780486, whole genome shotgun sequence 60,565
NZ_JACHTF010000023.1 Lysobacter spongiae strain 119BY6-57 NODE_23_length_47819_cov_37.580160, whole genome shotgun sequence 47,819
NZ_JACHTF010000024.1 Lysobacter spongiae strain 119BY6-57 NODE_24_length_41446_cov_74.303589, whole genome shotgun sequence 41,446
NZ_JACHTF010000025.1 Lysobacter spongiae strain 119BY6-57 NODE_25_length_31104_cov_49.717758, whole genome shotgun sequence 31,104
NZ_JACHTF010000026.1 Lysobacter spongiae strain 119BY6-57 NODE_26_length_21419_cov_69.878969, whole genome shotgun sequence 21,419
NZ_JACHTF010000027.1 Lysobacter spongiae strain 119BY6-57 NODE_27_length_15517_cov_36.092853, whole genome shotgun sequence 15,517
NZ_JACHTF010000028.1 Lysobacter spongiae strain 119BY6-57 NODE_28_length_7386_cov_4.114065, whole genome shotgun sequence 7,386
NZ_JACHTF010000029.1 Lysobacter spongiae strain 119BY6-57 NODE_29_length_6173_cov_56.982964, whole genome shotgun sequence 6,173
NZ_JACHTF010000030.1 Lysobacter spongiae strain 119BY6-57 NODE_30_length_5448_cov_169.497839, whole genome shotgun sequence 5,448
NZ_JACHTF010000031.1 Lysobacter spongiae strain 119BY6-57 NODE_31_length_5255_cov_37.832098, whole genome shotgun sequence 5,255
NZ_JACHTF010000032.1 Lysobacter spongiae strain 119BY6-57 NODE_32_length_3742_cov_34.469433, whole genome shotgun sequence 3,742
NZ_JACHTF010000033.1 Lysobacter spongiae strain 119BY6-57 NODE_33_length_3143_cov_45.947281, whole genome shotgun sequence 3,143
NZ_JACHTF010000034.1 Lysobacter spongiae strain 119BY6-57 NODE_34_length_2403_cov_106.347431, whole genome shotgun sequence 2,403
NZ_JACHTF010000035.1 Lysobacter spongiae strain 119BY6-57 NODE_35_length_2193_cov_35.846563, whole genome shotgun sequence 2,193
NZ_JACHTF010000036.1 Lysobacter spongiae strain 119BY6-57 NODE_36_length_1981_cov_54.891046, whole genome shotgun sequence 1,981
NZ_JACHTF010000037.1 Lysobacter spongiae strain 119BY6-57 NODE_37_length_1771_cov_34.105839, whole genome shotgun sequence 1,771
NZ_JACHTF010000038.1 Lysobacter spongiae strain 119BY6-57 NODE_39_length_1331_cov_64.442691, whole genome shotgun sequence 1,331
NZ_JACHTF010000039.1 Lysobacter spongiae strain 119BY6-57 NODE_40_length_1241_cov_366.862657, whole genome shotgun sequence 1,241
NZ_JACHTF010000040.1 Lysobacter spongiae strain 119BY6-57 NODE_41_length_1194_cov_226.286785, whole genome shotgun sequence 1,194
NZ_JACHTF010000041.1 Lysobacter spongiae strain 119BY6-57 NODE_42_length_1161_cov_46.287234, whole genome shotgun sequence 1,161
NZ_JACHTF010000042.1 Lysobacter spongiae strain 119BY6-57 NODE_43_length_1153_cov_49.869396, whole genome shotgun sequence 1,153
NZ_JACHTF010000043.1 Lysobacter spongiae strain 119BY6-57 NODE_44_length_1132_cov_69.240796, whole genome shotgun sequence 1,132
NZ_JACHTF010000044.1 Lysobacter spongiae strain 119BY6-57 NODE_45_length_1092_cov_55.317098, whole genome shotgun sequence 1,092
NZ_JACHTF010000045.1 Lysobacter spongiae strain 119BY6-57 NODE_48_length_894_cov_2.033898, whole genome shotgun sequence 894
NZ_JACHTF010000046.1 Lysobacter spongiae strain 119BY6-57 NODE_49_length_871_cov_185.571237, whole genome shotgun sequence 871
NZ_JACHTF010000047.1 Lysobacter spongiae strain 119BY6-57 NODE_50_length_863_cov_72.391304, whole genome shotgun sequence 863
NZ_JACHTF010000048.1 Lysobacter spongiae strain 119BY6-57 NODE_51_length_838_cov_107.285513, whole genome shotgun sequence 838
NZ_JACHTF010000049.1 Lysobacter spongiae strain 119BY6-57 NODE_52_length_818_cov_58.354559, whole genome shotgun sequence 818
NZ_JACHTF010000050.1 Lysobacter spongiae strain 119BY6-57 NODE_54_length_797_cov_109.059701, whole genome shotgun sequence 797
NZ_JACHTF010000051.1 Lysobacter spongiae strain 119BY6-57 NODE_60_length_659_cov_48.597744, whole genome shotgun sequence 659
NZ_JACHTF010000052.1 Lysobacter spongiae strain 119BY6-57 NODE_66_length_606_cov_111.707724, whole genome shotgun sequence 606
NZ_JACHTF010000053.1 Lysobacter spongiae strain 119BY6-57 NODE_69_length_575_cov_640.747768, whole genome shotgun sequence 575
NZ_JACHTF010000054.1 Lysobacter spongiae strain 119BY6-57 NODE_72_length_560_cov_25.429561, whole genome shotgun sequence 560

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory