fast.genomicscompare 6,575 genera of bacteria & archaea

 

Mobilitalea saccharofermentans MD1

Genome identifier: GCF_014174405.1

NCBI assembly name: ASM1417440v1

GTDB taxonomy: Bacteria, Bacillota_A, Clostridia, Lachnospirales, Lachnospiraceae, Mobilitalea, Mobilitalea saccharofermentans

NCBI taxonomy: Bacteria, Bacillota, Clostridia, Eubacteriales, Lachnospiraceae, Variimorphobacter, Variimorphobacter saccharofermentans

Scaffolds: 4

Genes: 3,654 Protein-coding: 3,548 RNAs: 71 pseudogenes: 35

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_JACEGA010000001.1 Variimorphobacter saccharofermentans strain MD1 NODE_1+2_length_4147987, whole genome shotgun sequence 4,147,987
NZ_JACEGA010000002.1 Variimorphobacter saccharofermentans strain MD1 NODE_3_length_12504, whole genome shotgun sequence 12,504
NZ_JACEGA010000003.1 Variimorphobacter saccharofermentans strain MD1 NODE_4_length_1515, whole genome shotgun sequence 1,515
NZ_JACEGA010000004.1 Variimorphobacter saccharofermentans strain MD1 NODE_5_length_1421, whole genome shotgun sequence 1,421

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory