fast.genomicscompare 6,575 genera of bacteria & archaea

 

Sphingomicrobium lutaoense DSM 24194

Genome identifier: GCF_014195685.1

NCBI assembly name: ASM1419568v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Sphingomonadales, Sphingomonadaceae, Sphingomicrobium, Sphingomicrobium lutaoense

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Sphingomonadales, Sphingomonadaceae, Sphingomicrobium, Sphingomicrobium lutaoense

Scaffolds: 2

Genes: 2,118 Protein-coding: 1,993 RNAs: 50 pseudogenes: 75

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_JACICF010000001.1 Sphingomicrobium lutaoense strain DSM 24194 Ga0373303_01, whole genome shotgun sequence 1,612,464
NZ_JACICF010000002.1 Sphingomicrobium lutaoense strain DSM 24194 Ga0373303_02, whole genome shotgun sequence 466,635

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory