fast.genomicscompare 6,575 genera of bacteria & archaea

 

Rhodobium orientis DSM 11290

Genome identifier: GCF_014197785.1

NCBI assembly name: ASM1419778v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhizobiales, Rhodobiaceae, Rhodobium, Rhodobium orientis

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Hyphomicrobiales, Rhodobiaceae, Rhodobium, Rhodobium orientis

Scaffolds: 46

Genes: 4,741 Protein-coding: 4,646 RNAs: 53 pseudogenes: 42

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_JACIGG010000001.1 Rhodobium orientis strain DSM 11290 Ga0394283_01, whole genome shotgun sequence 519,197
NZ_JACIGG010000002.1 Rhodobium orientis strain DSM 11290 Ga0394283_02, whole genome shotgun sequence 395,533
NZ_JACIGG010000003.1 Rhodobium orientis strain DSM 11290 Ga0394283_03, whole genome shotgun sequence 307,350
NZ_JACIGG010000004.1 Rhodobium orientis strain DSM 11290 Ga0394283_04, whole genome shotgun sequence 291,436
NZ_JACIGG010000005.1 Rhodobium orientis strain DSM 11290 Ga0394283_05, whole genome shotgun sequence 275,807
NZ_JACIGG010000006.1 Rhodobium orientis strain DSM 11290 Ga0394283_06, whole genome shotgun sequence 272,417
NZ_JACIGG010000007.1 Rhodobium orientis strain DSM 11290 Ga0394283_07, whole genome shotgun sequence 266,354
NZ_JACIGG010000008.1 Rhodobium orientis strain DSM 11290 Ga0394283_08, whole genome shotgun sequence 264,799
NZ_JACIGG010000009.1 Rhodobium orientis strain DSM 11290 Ga0394283_09, whole genome shotgun sequence 225,067
NZ_JACIGG010000010.1 Rhodobium orientis strain DSM 11290 Ga0394283_10, whole genome shotgun sequence 216,225
NZ_JACIGG010000011.1 Rhodobium orientis strain DSM 11290 Ga0394283_11, whole genome shotgun sequence 179,486
NZ_JACIGG010000012.1 Rhodobium orientis strain DSM 11290 Ga0394283_12, whole genome shotgun sequence 162,709
NZ_JACIGG010000013.1 Rhodobium orientis strain DSM 11290 Ga0394283_13, whole genome shotgun sequence 161,064
NZ_JACIGG010000014.1 Rhodobium orientis strain DSM 11290 Ga0394283_14, whole genome shotgun sequence 125,419
NZ_JACIGG010000015.1 Rhodobium orientis strain DSM 11290 Ga0394283_15, whole genome shotgun sequence 101,337
NZ_JACIGG010000016.1 Rhodobium orientis strain DSM 11290 Ga0394283_16, whole genome shotgun sequence 99,483
NZ_JACIGG010000017.1 Rhodobium orientis strain DSM 11290 Ga0394283_17, whole genome shotgun sequence 88,368
NZ_JACIGG010000018.1 Rhodobium orientis strain DSM 11290 Ga0394283_18, whole genome shotgun sequence 84,970
NZ_JACIGG010000019.1 Rhodobium orientis strain DSM 11290 Ga0394283_19, whole genome shotgun sequence 79,155
NZ_JACIGG010000020.1 Rhodobium orientis strain DSM 11290 Ga0394283_20, whole genome shotgun sequence 76,274
NZ_JACIGG010000021.1 Rhodobium orientis strain DSM 11290 Ga0394283_21, whole genome shotgun sequence 75,628
NZ_JACIGG010000022.1 Rhodobium orientis strain DSM 11290 Ga0394283_22, whole genome shotgun sequence 75,431
NZ_JACIGG010000023.1 Rhodobium orientis strain DSM 11290 Ga0394283_23, whole genome shotgun sequence 73,925
NZ_JACIGG010000024.1 Rhodobium orientis strain DSM 11290 Ga0394283_24, whole genome shotgun sequence 72,075
NZ_JACIGG010000025.1 Rhodobium orientis strain DSM 11290 Ga0394283_25, whole genome shotgun sequence 70,240
NZ_JACIGG010000026.1 Rhodobium orientis strain DSM 11290 Ga0394283_26, whole genome shotgun sequence 68,343
NZ_JACIGG010000027.1 Rhodobium orientis strain DSM 11290 Ga0394283_27, whole genome shotgun sequence 61,495
NZ_JACIGG010000028.1 Rhodobium orientis strain DSM 11290 Ga0394283_28, whole genome shotgun sequence 55,215
NZ_JACIGG010000029.1 Rhodobium orientis strain DSM 11290 Ga0394283_29, whole genome shotgun sequence 44,267
NZ_JACIGG010000030.1 Rhodobium orientis strain DSM 11290 Ga0394283_30, whole genome shotgun sequence 43,791
NZ_JACIGG010000031.1 Rhodobium orientis strain DSM 11290 Ga0394283_31, whole genome shotgun sequence 42,319
NZ_JACIGG010000032.1 Rhodobium orientis strain DSM 11290 Ga0394283_32, whole genome shotgun sequence 38,961
NZ_JACIGG010000033.1 Rhodobium orientis strain DSM 11290 Ga0394283_33, whole genome shotgun sequence 34,517
NZ_JACIGG010000034.1 Rhodobium orientis strain DSM 11290 Ga0394283_34, whole genome shotgun sequence 33,393
NZ_JACIGG010000035.1 Rhodobium orientis strain DSM 11290 Ga0394283_35, whole genome shotgun sequence 33,146
NZ_JACIGG010000036.1 Rhodobium orientis strain DSM 11290 Ga0394283_36, whole genome shotgun sequence 27,780
NZ_JACIGG010000037.1 Rhodobium orientis strain DSM 11290 Ga0394283_37, whole genome shotgun sequence 26,679
NZ_JACIGG010000038.1 Rhodobium orientis strain DSM 11290 Ga0394283_38, whole genome shotgun sequence 22,377
NZ_JACIGG010000039.1 Rhodobium orientis strain DSM 11290 Ga0394283_39, whole genome shotgun sequence 19,449
NZ_JACIGG010000040.1 Rhodobium orientis strain DSM 11290 Ga0394283_40, whole genome shotgun sequence 18,495
NZ_JACIGG010000041.1 Rhodobium orientis strain DSM 11290 Ga0394283_41, whole genome shotgun sequence 17,616
NZ_JACIGG010000042.1 Rhodobium orientis strain DSM 11290 Ga0394283_42, whole genome shotgun sequence 3,902
NZ_JACIGG010000043.1 Rhodobium orientis strain DSM 11290 Ga0394283_43, whole genome shotgun sequence 1,455
NZ_JACIGG010000044.1 Rhodobium orientis strain DSM 11290 Ga0394283_44, whole genome shotgun sequence 1,140
NZ_JACIGG010000045.1 Rhodobium orientis strain DSM 11290 Ga0394283_45, whole genome shotgun sequence 1,045
NZ_JACIGG010000046.1 Rhodobium orientis strain DSM 11290 Ga0394283_46, whole genome shotgun sequence 1,037

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory