fast.genomicscompare 6,575 genera of bacteria & archaea

 

Ochrobactrum_C daejeonensis DSM 26944

Genome identifier: GCF_014199265.1

NCBI assembly name: ASM1419926v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhizobiales, Rhizobiaceae, Ochrobactrum_C, Ochrobactrum_C daejeonensis

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Hyphomicrobiales, Brucellaceae, Brucella, Brucella daejeonensis

Scaffolds: 55

Genes: 4,504 Protein-coding: 4,374 RNAs: 59 pseudogenes: 71

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_JACIJG010000001.1 Brucella daejeonensis strain DSM 26944 Ga0373340_01, whole genome shotgun sequence 468,945
NZ_JACIJG010000002.1 Brucella daejeonensis strain DSM 26944 Ga0373340_02, whole genome shotgun sequence 369,619
NZ_JACIJG010000003.1 Brucella daejeonensis strain DSM 26944 Ga0373340_03, whole genome shotgun sequence 348,530
NZ_JACIJG010000004.1 Brucella daejeonensis strain DSM 26944 Ga0373340_04, whole genome shotgun sequence 324,305
NZ_JACIJG010000005.1 Brucella daejeonensis strain DSM 26944 Ga0373340_05, whole genome shotgun sequence 312,334
NZ_JACIJG010000006.1 Brucella daejeonensis strain DSM 26944 Ga0373340_06, whole genome shotgun sequence 304,765
NZ_JACIJG010000007.1 Brucella daejeonensis strain DSM 26944 Ga0373340_07, whole genome shotgun sequence 252,428
NZ_JACIJG010000008.1 Brucella daejeonensis strain DSM 26944 Ga0373340_08, whole genome shotgun sequence 225,758
NZ_JACIJG010000009.1 Brucella daejeonensis strain DSM 26944 Ga0373340_09, whole genome shotgun sequence 212,692
NZ_JACIJG010000010.1 Brucella daejeonensis strain DSM 26944 Ga0373340_10, whole genome shotgun sequence 186,909
NZ_JACIJG010000011.1 Brucella daejeonensis strain DSM 26944 Ga0373340_11, whole genome shotgun sequence 173,436
NZ_JACIJG010000012.1 Brucella daejeonensis strain DSM 26944 Ga0373340_12, whole genome shotgun sequence 135,839
NZ_JACIJG010000013.1 Brucella daejeonensis strain DSM 26944 Ga0373340_13, whole genome shotgun sequence 113,932
NZ_JACIJG010000014.1 Brucella daejeonensis strain DSM 26944 Ga0373340_14, whole genome shotgun sequence 103,689
NZ_JACIJG010000015.1 Brucella daejeonensis strain DSM 26944 Ga0373340_15, whole genome shotgun sequence 80,566
NZ_JACIJG010000016.1 Brucella daejeonensis strain DSM 26944 Ga0373340_16, whole genome shotgun sequence 74,049
NZ_JACIJG010000017.1 Brucella daejeonensis strain DSM 26944 Ga0373340_17, whole genome shotgun sequence 71,921
NZ_JACIJG010000018.1 Brucella daejeonensis strain DSM 26944 Ga0373340_18, whole genome shotgun sequence 62,427
NZ_JACIJG010000019.1 Brucella daejeonensis strain DSM 26944 Ga0373340_19, whole genome shotgun sequence 60,974
NZ_JACIJG010000020.1 Brucella daejeonensis strain DSM 26944 Ga0373340_20, whole genome shotgun sequence 60,345
NZ_JACIJG010000021.1 Brucella daejeonensis strain DSM 26944 Ga0373340_21, whole genome shotgun sequence 57,910
NZ_JACIJG010000022.1 Brucella daejeonensis strain DSM 26944 Ga0373340_22, whole genome shotgun sequence 54,123
NZ_JACIJG010000023.1 Brucella daejeonensis strain DSM 26944 Ga0373340_23, whole genome shotgun sequence 53,158
NZ_JACIJG010000024.1 Brucella daejeonensis strain DSM 26944 Ga0373340_24, whole genome shotgun sequence 52,657
NZ_JACIJG010000025.1 Brucella daejeonensis strain DSM 26944 Ga0373340_25, whole genome shotgun sequence 49,312
NZ_JACIJG010000026.1 Brucella daejeonensis strain DSM 26944 Ga0373340_26, whole genome shotgun sequence 44,956
NZ_JACIJG010000027.1 Brucella daejeonensis strain DSM 26944 Ga0373340_27, whole genome shotgun sequence 42,186
NZ_JACIJG010000028.1 Brucella daejeonensis strain DSM 26944 Ga0373340_28, whole genome shotgun sequence 37,914
NZ_JACIJG010000029.1 Brucella daejeonensis strain DSM 26944 Ga0373340_29, whole genome shotgun sequence 37,715
NZ_JACIJG010000030.1 Brucella daejeonensis strain DSM 26944 Ga0373340_30, whole genome shotgun sequence 35,605
NZ_JACIJG010000031.1 Brucella daejeonensis strain DSM 26944 Ga0373340_31, whole genome shotgun sequence 34,208
NZ_JACIJG010000032.1 Brucella daejeonensis strain DSM 26944 Ga0373340_32, whole genome shotgun sequence 30,007
NZ_JACIJG010000033.1 Brucella daejeonensis strain DSM 26944 Ga0373340_33, whole genome shotgun sequence 29,363
NZ_JACIJG010000034.1 Brucella daejeonensis strain DSM 26944 Ga0373340_34, whole genome shotgun sequence 22,925
NZ_JACIJG010000035.1 Brucella daejeonensis strain DSM 26944 Ga0373340_35, whole genome shotgun sequence 18,120
NZ_JACIJG010000036.1 Brucella daejeonensis strain DSM 26944 Ga0373340_36, whole genome shotgun sequence 11,900
NZ_JACIJG010000037.1 Brucella daejeonensis strain DSM 26944 Ga0373340_37, whole genome shotgun sequence 11,823
NZ_JACIJG010000038.1 Brucella daejeonensis strain DSM 26944 Ga0373340_38, whole genome shotgun sequence 11,248
NZ_JACIJG010000039.1 Brucella daejeonensis strain DSM 26944 Ga0373340_39, whole genome shotgun sequence 11,077
NZ_JACIJG010000040.1 Brucella daejeonensis strain DSM 26944 Ga0373340_40, whole genome shotgun sequence 9,224
NZ_JACIJG010000041.1 Brucella daejeonensis strain DSM 26944 Ga0373340_41, whole genome shotgun sequence 6,524
NZ_JACIJG010000042.1 Brucella daejeonensis strain DSM 26944 Ga0373340_42, whole genome shotgun sequence 5,746
NZ_JACIJG010000043.1 Brucella daejeonensis strain DSM 26944 Ga0373340_43, whole genome shotgun sequence 4,967
NZ_JACIJG010000044.1 Brucella daejeonensis strain DSM 26944 Ga0373340_44, whole genome shotgun sequence 3,757
NZ_JACIJG010000045.1 Brucella daejeonensis strain DSM 26944 Ga0373340_45, whole genome shotgun sequence 3,535
NZ_JACIJG010000046.1 Brucella daejeonensis strain DSM 26944 Ga0373340_46, whole genome shotgun sequence 3,200
NZ_JACIJG010000047.1 Brucella daejeonensis strain DSM 26944 Ga0373340_47, whole genome shotgun sequence 2,837
NZ_JACIJG010000048.1 Brucella daejeonensis strain DSM 26944 Ga0373340_48, whole genome shotgun sequence 2,817
NZ_JACIJG010000049.1 Brucella daejeonensis strain DSM 26944 Ga0373340_49, whole genome shotgun sequence 2,614
NZ_JACIJG010000050.1 Brucella daejeonensis strain DSM 26944 Ga0373340_50, whole genome shotgun sequence 1,504
NZ_JACIJG010000051.1 Brucella daejeonensis strain DSM 26944 Ga0373340_51, whole genome shotgun sequence 1,321
NZ_JACIJG010000052.1 Brucella daejeonensis strain DSM 26944 Ga0373340_52, whole genome shotgun sequence 1,234
NZ_JACIJG010000053.1 Brucella daejeonensis strain DSM 26944 Ga0373340_53, whole genome shotgun sequence 1,151
NZ_JACIJG010000054.1 Brucella daejeonensis strain DSM 26944 Ga0373340_54, whole genome shotgun sequence 1,150
NZ_JACIJG010000055.1 Brucella daejeonensis strain DSM 26944 Ga0373340_55, whole genome shotgun sequence 1,128

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory