fast.genomicscompare 6,575 genera of bacteria & archaea

 

Rubricella aquisinus DSM 103377

Genome identifier: GCF_014199445.1

NCBI assembly name: ASM1419944v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Rhodobacteraceae, Rubricella, Rubricella aquisinus

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Paracoccaceae, Rubricella, Rubricella aquisinus

Scaffolds: 23

Genes: 3,241 Protein-coding: 3,137 RNAs: 48 pseudogenes: 56

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_JACIJS010000001.1 Rubricella aquisinus strain DSM 103377 Ga0373370_01, whole genome shotgun sequence 663,789
NZ_JACIJS010000002.1 Rubricella aquisinus strain DSM 103377 Ga0373370_02, whole genome shotgun sequence 360,872
NZ_JACIJS010000003.1 Rubricella aquisinus strain DSM 103377 Ga0373370_03, whole genome shotgun sequence 357,274
NZ_JACIJS010000004.1 Rubricella aquisinus strain DSM 103377 Ga0373370_04, whole genome shotgun sequence 340,195
NZ_JACIJS010000005.1 Rubricella aquisinus strain DSM 103377 Ga0373370_05, whole genome shotgun sequence 339,925
NZ_JACIJS010000006.1 Rubricella aquisinus strain DSM 103377 Ga0373370_06, whole genome shotgun sequence 296,639
NZ_JACIJS010000007.1 Rubricella aquisinus strain DSM 103377 Ga0373370_07, whole genome shotgun sequence 278,129
NZ_JACIJS010000008.1 Rubricella aquisinus strain DSM 103377 Ga0373370_08, whole genome shotgun sequence 140,752
NZ_JACIJS010000009.1 Rubricella aquisinus strain DSM 103377 Ga0373370_09, whole genome shotgun sequence 106,039
NZ_JACIJS010000010.1 Rubricella aquisinus strain DSM 103377 Ga0373370_10, whole genome shotgun sequence 79,203
NZ_JACIJS010000011.1 Rubricella aquisinus strain DSM 103377 Ga0373370_11, whole genome shotgun sequence 76,601
NZ_JACIJS010000012.1 Rubricella aquisinus strain DSM 103377 Ga0373370_12, whole genome shotgun sequence 72,633
NZ_JACIJS010000013.1 Rubricella aquisinus strain DSM 103377 Ga0373370_13, whole genome shotgun sequence 41,211
NZ_JACIJS010000014.1 Rubricella aquisinus strain DSM 103377 Ga0373370_14, whole genome shotgun sequence 20,267
NZ_JACIJS010000015.1 Rubricella aquisinus strain DSM 103377 Ga0373370_15, whole genome shotgun sequence 20,169
NZ_JACIJS010000016.1 Rubricella aquisinus strain DSM 103377 Ga0373370_16, whole genome shotgun sequence 19,215
NZ_JACIJS010000017.1 Rubricella aquisinus strain DSM 103377 Ga0373370_17, whole genome shotgun sequence 7,412
NZ_JACIJS010000018.1 Rubricella aquisinus strain DSM 103377 Ga0373370_18, whole genome shotgun sequence 6,879
NZ_JACIJS010000019.1 Rubricella aquisinus strain DSM 103377 Ga0373370_19, whole genome shotgun sequence 5,976
NZ_JACIJS010000020.1 Rubricella aquisinus strain DSM 103377 Ga0373370_20, whole genome shotgun sequence 3,878
NZ_JACIJS010000021.1 Rubricella aquisinus strain DSM 103377 Ga0373370_21, whole genome shotgun sequence 2,189
NZ_JACIJS010000022.1 Rubricella aquisinus strain DSM 103377 Ga0373370_22, whole genome shotgun sequence 2,117
NZ_JACIJS010000023.1 Rubricella aquisinus strain DSM 103377 Ga0373370_23, whole genome shotgun sequence 1,807

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory