fast.genomicscompare 6,575 genera of bacteria & archaea

 

Prosthecomicrobium pneumaticum DSM 16268

Genome identifier: GCF_014199915.1

NCBI assembly name: ASM1419991v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhizobiales, Kaistiaceae, Prosthecomicrobium, Prosthecomicrobium pneumaticum

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Hyphomicrobiales, Kaistiaceae, Prosthecomicrobium, Prosthecomicrobium pneumaticum

Scaffolds: 24

Genes: 4,386 Protein-coding: 4,174 RNAs: 53 pseudogenes: 159

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_JACHOO010000001.1 Prosthecomicrobium pneumaticum strain DSM 16268 Ga0373197_01, whole genome shotgun sequence 805,523
NZ_JACHOO010000002.1 Prosthecomicrobium pneumaticum strain DSM 16268 Ga0373197_02, whole genome shotgun sequence 740,691
NZ_JACHOO010000003.1 Prosthecomicrobium pneumaticum strain DSM 16268 Ga0373197_03, whole genome shotgun sequence 690,081
NZ_JACHOO010000004.1 Prosthecomicrobium pneumaticum strain DSM 16268 Ga0373197_04, whole genome shotgun sequence 406,641
NZ_JACHOO010000005.1 Prosthecomicrobium pneumaticum strain DSM 16268 Ga0373197_05, whole genome shotgun sequence 394,850
NZ_JACHOO010000006.1 Prosthecomicrobium pneumaticum strain DSM 16268 Ga0373197_06, whole genome shotgun sequence 391,020
NZ_JACHOO010000007.1 Prosthecomicrobium pneumaticum strain DSM 16268 Ga0373197_07, whole genome shotgun sequence 210,389
NZ_JACHOO010000008.1 Prosthecomicrobium pneumaticum strain DSM 16268 Ga0373197_08, whole genome shotgun sequence 203,613
NZ_JACHOO010000009.1 Prosthecomicrobium pneumaticum strain DSM 16268 Ga0373197_09, whole genome shotgun sequence 178,540
NZ_JACHOO010000010.1 Prosthecomicrobium pneumaticum strain DSM 16268 Ga0373197_10, whole genome shotgun sequence 171,297
NZ_JACHOO010000011.1 Prosthecomicrobium pneumaticum strain DSM 16268 Ga0373197_11, whole genome shotgun sequence 109,628
NZ_JACHOO010000012.1 Prosthecomicrobium pneumaticum strain DSM 16268 Ga0373197_12, whole genome shotgun sequence 99,420
NZ_JACHOO010000013.1 Prosthecomicrobium pneumaticum strain DSM 16268 Ga0373197_13, whole genome shotgun sequence 65,694
NZ_JACHOO010000014.1 Prosthecomicrobium pneumaticum strain DSM 16268 Ga0373197_14, whole genome shotgun sequence 60,863
NZ_JACHOO010000015.1 Prosthecomicrobium pneumaticum strain DSM 16268 Ga0373197_15, whole genome shotgun sequence 47,802
NZ_JACHOO010000016.1 Prosthecomicrobium pneumaticum strain DSM 16268 Ga0373197_16, whole genome shotgun sequence 29,843
NZ_JACHOO010000017.1 Prosthecomicrobium pneumaticum strain DSM 16268 Ga0373197_17, whole genome shotgun sequence 12,693
NZ_JACHOO010000018.1 Prosthecomicrobium pneumaticum strain DSM 16268 Ga0373197_18, whole genome shotgun sequence 8,908
NZ_JACHOO010000019.1 Prosthecomicrobium pneumaticum strain DSM 16268 Ga0373197_19, whole genome shotgun sequence 7,183
NZ_JACHOO010000020.1 Prosthecomicrobium pneumaticum strain DSM 16268 Ga0373197_20, whole genome shotgun sequence 6,961
NZ_JACHOO010000021.1 Prosthecomicrobium pneumaticum strain DSM 16268 Ga0373197_21, whole genome shotgun sequence 5,137
NZ_JACHOO010000022.1 Prosthecomicrobium pneumaticum strain DSM 16268 Ga0373197_22, whole genome shotgun sequence 2,379
NZ_JACHOO010000023.1 Prosthecomicrobium pneumaticum strain DSM 16268 Ga0373197_23, whole genome shotgun sequence 2,376
NZ_JACHOO010000024.1 Prosthecomicrobium pneumaticum strain DSM 16268 Ga0373197_24, whole genome shotgun sequence 1,239

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory