fast.genomicscompare 6,575 genera of bacteria & archaea

 

Rhizorhapis suberifaciens DSM 7465

Genome identifier: GCF_014200045.1

NCBI assembly name: ASM1420004v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Sphingomonadales, Sphingomonadaceae, Rhizorhapis, Rhizorhapis suberifaciens

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Sphingomonadales, Sphingomonadaceae, Rhizorhapis, Rhizorhapis suberifaciens

Scaffolds: 34

Genes: 3,276 Protein-coding: 3,183 RNAs: 53 pseudogenes: 40

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_JACHOV010000001.1 Rhizorhapis suberifaciens strain DSM 7465 Ga0373210_01, whole genome shotgun sequence 449,001
NZ_JACHOV010000002.1 Rhizorhapis suberifaciens strain DSM 7465 Ga0373210_02, whole genome shotgun sequence 393,842
NZ_JACHOV010000003.1 Rhizorhapis suberifaciens strain DSM 7465 Ga0373210_03, whole genome shotgun sequence 366,566
NZ_JACHOV010000004.1 Rhizorhapis suberifaciens strain DSM 7465 Ga0373210_04, whole genome shotgun sequence 268,105
NZ_JACHOV010000005.1 Rhizorhapis suberifaciens strain DSM 7465 Ga0373210_05, whole genome shotgun sequence 266,381
NZ_JACHOV010000006.1 Rhizorhapis suberifaciens strain DSM 7465 Ga0373210_06, whole genome shotgun sequence 242,870
NZ_JACHOV010000007.1 Rhizorhapis suberifaciens strain DSM 7465 Ga0373210_07, whole genome shotgun sequence 211,933
NZ_JACHOV010000008.1 Rhizorhapis suberifaciens strain DSM 7465 Ga0373210_08, whole genome shotgun sequence 211,899
NZ_JACHOV010000009.1 Rhizorhapis suberifaciens strain DSM 7465 Ga0373210_09, whole genome shotgun sequence 167,765
NZ_JACHOV010000010.1 Rhizorhapis suberifaciens strain DSM 7465 Ga0373210_10, whole genome shotgun sequence 166,824
NZ_JACHOV010000011.1 Rhizorhapis suberifaciens strain DSM 7465 Ga0373210_11, whole genome shotgun sequence 150,872
NZ_JACHOV010000012.1 Rhizorhapis suberifaciens strain DSM 7465 Ga0373210_12, whole genome shotgun sequence 100,203
NZ_JACHOV010000013.1 Rhizorhapis suberifaciens strain DSM 7465 Ga0373210_13, whole genome shotgun sequence 56,379
NZ_JACHOV010000014.1 Rhizorhapis suberifaciens strain DSM 7465 Ga0373210_14, whole genome shotgun sequence 52,680
NZ_JACHOV010000015.1 Rhizorhapis suberifaciens strain DSM 7465 Ga0373210_15, whole genome shotgun sequence 37,632
NZ_JACHOV010000016.1 Rhizorhapis suberifaciens strain DSM 7465 Ga0373210_16, whole genome shotgun sequence 31,811
NZ_JACHOV010000017.1 Rhizorhapis suberifaciens strain DSM 7465 Ga0373210_17, whole genome shotgun sequence 29,881
NZ_JACHOV010000018.1 Rhizorhapis suberifaciens strain DSM 7465 Ga0373210_18, whole genome shotgun sequence 23,002
NZ_JACHOV010000019.1 Rhizorhapis suberifaciens strain DSM 7465 Ga0373210_19, whole genome shotgun sequence 21,199
NZ_JACHOV010000020.1 Rhizorhapis suberifaciens strain DSM 7465 Ga0373210_20, whole genome shotgun sequence 18,951
NZ_JACHOV010000021.1 Rhizorhapis suberifaciens strain DSM 7465 Ga0373210_21, whole genome shotgun sequence 15,909
NZ_JACHOV010000022.1 Rhizorhapis suberifaciens strain DSM 7465 Ga0373210_22, whole genome shotgun sequence 14,538
NZ_JACHOV010000023.1 Rhizorhapis suberifaciens strain DSM 7465 Ga0373210_23, whole genome shotgun sequence 12,279
NZ_JACHOV010000024.1 Rhizorhapis suberifaciens strain DSM 7465 Ga0373210_24, whole genome shotgun sequence 12,221
NZ_JACHOV010000025.1 Rhizorhapis suberifaciens strain DSM 7465 Ga0373210_25, whole genome shotgun sequence 9,016
NZ_JACHOV010000026.1 Rhizorhapis suberifaciens strain DSM 7465 Ga0373210_26, whole genome shotgun sequence 8,904
NZ_JACHOV010000027.1 Rhizorhapis suberifaciens strain DSM 7465 Ga0373210_27, whole genome shotgun sequence 5,603
NZ_JACHOV010000028.1 Rhizorhapis suberifaciens strain DSM 7465 Ga0373210_28, whole genome shotgun sequence 4,492
NZ_JACHOV010000029.1 Rhizorhapis suberifaciens strain DSM 7465 Ga0373210_29, whole genome shotgun sequence 2,539
NZ_JACHOV010000030.1 Rhizorhapis suberifaciens strain DSM 7465 Ga0373210_30, whole genome shotgun sequence 1,730
NZ_JACHOV010000031.1 Rhizorhapis suberifaciens strain DSM 7465 Ga0373210_31, whole genome shotgun sequence 1,608
NZ_JACHOV010000032.1 Rhizorhapis suberifaciens strain DSM 7465 Ga0373210_32, whole genome shotgun sequence 1,578
NZ_JACHOV010000033.1 Rhizorhapis suberifaciens strain DSM 7465 Ga0373210_33, whole genome shotgun sequence 1,013
NZ_JACHOV010000034.1 Rhizorhapis suberifaciens strain DSM 7465 Ga0373210_34, whole genome shotgun sequence 1,002

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory