fast.genomicscompare 6,575 genera of bacteria & archaea

 

Pontibrevibacter nitratireducens h42

Genome identifier: GCF_014235845.1

NCBI assembly name: ASM1423584v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Rhodobacteraceae, Pontibrevibacter, Pontibrevibacter nitratireducens

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Paracoccaceae, Pontibrevibacter, Pontibrevibacter nitratireducens

Scaffolds: 43

Genes: 3,485 Protein-coding: 3,344 RNAs: 47 pseudogenes: 94

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_JACJUQ010000001.1 Pontibrevibacter nitratireducens strain h42 NODE_1_length_526627_cov_243.804307, whole genome shotgun sequence 526,627
NZ_JACJUQ010000002.1 Pontibrevibacter nitratireducens strain h42 NODE_2_length_350750_cov_238.646209, whole genome shotgun sequence 350,750
NZ_JACJUQ010000003.1 Pontibrevibacter nitratireducens strain h42 NODE_3_length_282141_cov_260.721407, whole genome shotgun sequence 282,141
NZ_JACJUQ010000004.1 Pontibrevibacter nitratireducens strain h42 NODE_4_length_280170_cov_252.763289, whole genome shotgun sequence 280,170
NZ_JACJUQ010000005.1 Pontibrevibacter nitratireducens strain h42 NODE_5_length_242389_cov_246.188625, whole genome shotgun sequence 242,389
NZ_JACJUQ010000006.1 Pontibrevibacter nitratireducens strain h42 NODE_6_length_227871_cov_261.041634, whole genome shotgun sequence 227,871
NZ_JACJUQ010000007.1 Pontibrevibacter nitratireducens strain h42 NODE_7_length_181095_cov_259.108067, whole genome shotgun sequence 181,095
NZ_JACJUQ010000008.1 Pontibrevibacter nitratireducens strain h42 NODE_8_length_171542_cov_248.812142, whole genome shotgun sequence 171,542
NZ_JACJUQ010000009.1 Pontibrevibacter nitratireducens strain h42 NODE_9_length_149712_cov_201.100170, whole genome shotgun sequence 149,712
NZ_JACJUQ010000010.1 Pontibrevibacter nitratireducens strain h42 NODE_10_length_147132_cov_235.404325, whole genome shotgun sequence 147,132
NZ_JACJUQ010000011.1 Pontibrevibacter nitratireducens strain h42 NODE_11_length_141636_cov_254.786887, whole genome shotgun sequence 141,636
NZ_JACJUQ010000012.1 Pontibrevibacter nitratireducens strain h42 NODE_12_length_99219_cov_233.195659, whole genome shotgun sequence 99,219
NZ_JACJUQ010000013.1 Pontibrevibacter nitratireducens strain h42 NODE_13_length_90587_cov_421.004994, whole genome shotgun sequence 90,587
NZ_JACJUQ010000014.1 Pontibrevibacter nitratireducens strain h42 NODE_14_length_79379_cov_277.981085, whole genome shotgun sequence 79,379
NZ_JACJUQ010000015.1 Pontibrevibacter nitratireducens strain h42 NODE_15_length_49587_cov_261.239123, whole genome shotgun sequence 49,587
NZ_JACJUQ010000016.1 Pontibrevibacter nitratireducens strain h42 NODE_16_length_49190_cov_236.081465, whole genome shotgun sequence 49,190
NZ_JACJUQ010000017.1 Pontibrevibacter nitratireducens strain h42 NODE_17_length_47986_cov_255.621094, whole genome shotgun sequence 47,986
NZ_JACJUQ010000018.1 Pontibrevibacter nitratireducens strain h42 NODE_18_length_46460_cov_222.935428, whole genome shotgun sequence 46,460
NZ_JACJUQ010000019.1 Pontibrevibacter nitratireducens strain h42 NODE_19_length_42143_cov_274.587719, whole genome shotgun sequence 42,143
NZ_JACJUQ010000020.1 Pontibrevibacter nitratireducens strain h42 NODE_20_length_34937_cov_221.901377, whole genome shotgun sequence 34,937
NZ_JACJUQ010000021.1 Pontibrevibacter nitratireducens strain h42 NODE_21_length_34643_cov_227.112972, whole genome shotgun sequence 34,643
NZ_JACJUQ010000022.1 Pontibrevibacter nitratireducens strain h42 NODE_22_length_30618_cov_260.736715, whole genome shotgun sequence 30,618
NZ_JACJUQ010000023.1 Pontibrevibacter nitratireducens strain h42 NODE_23_length_29128_cov_222.677361, whole genome shotgun sequence 29,128
NZ_JACJUQ010000024.1 Pontibrevibacter nitratireducens strain h42 NODE_24_length_29011_cov_239.290212, whole genome shotgun sequence 29,011
NZ_JACJUQ010000025.1 Pontibrevibacter nitratireducens strain h42 NODE_25_length_27231_cov_310.757642, whole genome shotgun sequence 27,231
NZ_JACJUQ010000026.1 Pontibrevibacter nitratireducens strain h42 NODE_26_length_19075_cov_262.413886, whole genome shotgun sequence 19,075
NZ_JACJUQ010000027.1 Pontibrevibacter nitratireducens strain h42 NODE_27_length_15409_cov_441.287960, whole genome shotgun sequence 15,409
NZ_JACJUQ010000028.1 Pontibrevibacter nitratireducens strain h42 NODE_28_length_12900_cov_430.144740, whole genome shotgun sequence 12,900
NZ_JACJUQ010000029.1 Pontibrevibacter nitratireducens strain h42 NODE_29_length_12557_cov_220.057372, whole genome shotgun sequence 12,557
NZ_JACJUQ010000030.1 Pontibrevibacter nitratireducens strain h42 NODE_30_length_12307_cov_1949.367457, whole genome shotgun sequence 12,307
NZ_JACJUQ010000031.1 Pontibrevibacter nitratireducens strain h42 NODE_31_length_10416_cov_240.646387, whole genome shotgun sequence 10,416
NZ_JACJUQ010000032.1 Pontibrevibacter nitratireducens strain h42 NODE_32_length_9671_cov_1779.488326, whole genome shotgun sequence 9,671
NZ_JACJUQ010000033.1 Pontibrevibacter nitratireducens strain h42 NODE_33_length_8576_cov_303.769149, whole genome shotgun sequence 8,576
NZ_JACJUQ010000034.1 Pontibrevibacter nitratireducens strain h42 NODE_34_length_8490_cov_249.993581, whole genome shotgun sequence 8,490
NZ_JACJUQ010000035.1 Pontibrevibacter nitratireducens strain h42 NODE_35_length_7619_cov_232.296738, whole genome shotgun sequence 7,619
NZ_JACJUQ010000036.1 Pontibrevibacter nitratireducens strain h42 NODE_36_length_6302_cov_442.509719, whole genome shotgun sequence 6,302
NZ_JACJUQ010000037.1 Pontibrevibacter nitratireducens strain h42 NODE_37_length_6129_cov_226.429280, whole genome shotgun sequence 6,129
NZ_JACJUQ010000038.1 Pontibrevibacter nitratireducens strain h42 NODE_38_length_5836_cov_654.296927, whole genome shotgun sequence 5,836
NZ_JACJUQ010000039.1 Pontibrevibacter nitratireducens strain h42 NODE_39_length_5641_cov_511.957225, whole genome shotgun sequence 5,641
NZ_JACJUQ010000040.1 Pontibrevibacter nitratireducens strain h42 NODE_40_length_4922_cov_218.763880, whole genome shotgun sequence 4,922
NZ_JACJUQ010000041.1 Pontibrevibacter nitratireducens strain h42 NODE_41_length_3508_cov_528.111921, whole genome shotgun sequence 3,508
NZ_JACJUQ010000042.1 Pontibrevibacter nitratireducens strain h42 NODE_42_length_3240_cov_316.460322, whole genome shotgun sequence 3,240
NZ_JACJUQ010000043.1 Pontibrevibacter nitratireducens strain h42 NODE_43_length_2049_cov_217.258114, whole genome shotgun sequence 2,049

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory