fast.genomicscompare 6,575 genera of bacteria & archaea

 

JACLZJ01 sp014253075 CM-21-5

Genome identifier: GCF_014253075.1

NCBI assembly name: ASM1425307v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhizobiales, Rhizobiaceae, JACLZJ01, JACLZJ01 sp014253075

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Hyphomicrobiales, Brucellaceae, Ochrobactrum

Scaffolds: 28

Genes: 4,135 Protein-coding: 3,945 RNAs: 61 pseudogenes: 129

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_JACLZJ010000001.1 Ochrobactrum sp. CM-21-5 scaffold1, whole genome shotgun sequence 1,452,936
NZ_JACLZJ010000002.1 Ochrobactrum sp. CM-21-5 scaffold2, whole genome shotgun sequence 748,197
NZ_JACLZJ010000003.1 Ochrobactrum sp. CM-21-5 scaffold3, whole genome shotgun sequence 534,627
NZ_JACLZJ010000004.1 Ochrobactrum sp. CM-21-5 scaffold4, whole genome shotgun sequence 346,877
NZ_JACLZJ010000005.1 Ochrobactrum sp. CM-21-5 scaffold5, whole genome shotgun sequence 285,544
NZ_JACLZJ010000006.1 Ochrobactrum sp. CM-21-5 scaffold6, whole genome shotgun sequence 140,912
NZ_JACLZJ010000007.1 Ochrobactrum sp. CM-21-5 scaffold7, whole genome shotgun sequence 138,358
NZ_JACLZJ010000008.1 Ochrobactrum sp. CM-21-5 scaffold8, whole genome shotgun sequence 112,117
NZ_JACLZJ010000009.1 Ochrobactrum sp. CM-21-5 scaffold9, whole genome shotgun sequence 109,609
NZ_JACLZJ010000010.1 Ochrobactrum sp. CM-21-5 scaffold10, whole genome shotgun sequence 80,506
NZ_JACLZJ010000011.1 Ochrobactrum sp. CM-21-5 scaffold11, whole genome shotgun sequence 63,728
NZ_JACLZJ010000012.1 Ochrobactrum sp. CM-21-5 scaffold12, whole genome shotgun sequence 60,697
NZ_JACLZJ010000013.1 Ochrobactrum sp. CM-21-5 scaffold13, whole genome shotgun sequence 54,049
NZ_JACLZJ010000014.1 Ochrobactrum sp. CM-21-5 scaffold14, whole genome shotgun sequence 53,248
NZ_JACLZJ010000015.1 Ochrobactrum sp. CM-21-5 scaffold15, whole genome shotgun sequence 45,294
NZ_JACLZJ010000016.1 Ochrobactrum sp. CM-21-5 scaffold16, whole genome shotgun sequence 17,128
NZ_JACLZJ010000017.1 Ochrobactrum sp. CM-21-5 scaffold17, whole genome shotgun sequence 16,054
NZ_JACLZJ010000018.1 Ochrobactrum sp. CM-21-5 scaffold18, whole genome shotgun sequence 8,901
NZ_JACLZJ010000019.1 Ochrobactrum sp. CM-21-5 scaffold19, whole genome shotgun sequence 6,053
NZ_JACLZJ010000020.1 Ochrobactrum sp. CM-21-5 scaffold20, whole genome shotgun sequence 2,777
NZ_JACLZJ010000021.1 Ochrobactrum sp. CM-21-5 scaffold21, whole genome shotgun sequence 2,287
NZ_JACLZJ010000022.1 Ochrobactrum sp. CM-21-5 scaffold22, whole genome shotgun sequence 2,049
NZ_JACLZJ010000023.1 Ochrobactrum sp. CM-21-5 scaffold23, whole genome shotgun sequence 1,235
NZ_JACLZJ010000024.1 Ochrobactrum sp. CM-21-5 scaffold24, whole genome shotgun sequence 1,222
NZ_JACLZJ010000025.1 Ochrobactrum sp. CM-21-5 scaffold25, whole genome shotgun sequence 1,176
NZ_JACLZJ010000026.1 Ochrobactrum sp. CM-21-5 scaffold26, whole genome shotgun sequence 987
NZ_JACLZJ010000027.1 Ochrobactrum sp. CM-21-5 scaffold27, whole genome shotgun sequence 831
NZ_JACLZJ010000028.1 Ochrobactrum sp. CM-21-5 scaffold28, whole genome shotgun sequence 781

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory