fast.genomicscompare 6,575 genera of bacteria & archaea

 

Roseburia_D yibonii BX0805

Genome identifier: GCF_014297335.1

NCBI assembly name: ASM1429733v1

GTDB taxonomy: Bacteria, Bacillota_A, Clostridia, Lachnospirales, Lachnospiraceae, Roseburia_D, Roseburia_D yibonii

NCBI taxonomy: Bacteria, Bacillota, Clostridia, Eubacteriales, Lachnospiraceae, Roseburia, Roseburia yibonii

Scaffolds: 28

Genes: 2,718 Protein-coding: 2,614 RNAs: 71 pseudogenes: 33

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_JACOQH010000001.1 Roseburia yibonii strain BX0805 DNA.637_ctg0001, whole genome shotgun sequence 543,003
NZ_JACOQH010000002.1 Roseburia yibonii strain BX0805 DNA.637_ctg0002, whole genome shotgun sequence 421,170
NZ_JACOQH010000003.1 Roseburia yibonii strain BX0805 DNA.637_ctg0003, whole genome shotgun sequence 361,412
NZ_JACOQH010000004.1 Roseburia yibonii strain BX0805 DNA.637_ctg0004, whole genome shotgun sequence 260,900
NZ_JACOQH010000005.1 Roseburia yibonii strain BX0805 DNA.637_ctg0005, whole genome shotgun sequence 214,622
NZ_JACOQH010000006.1 Roseburia yibonii strain BX0805 DNA.637_ctg0006, whole genome shotgun sequence 169,874
NZ_JACOQH010000007.1 Roseburia yibonii strain BX0805 DNA.637_ctg0007, whole genome shotgun sequence 166,318
NZ_JACOQH010000008.1 Roseburia yibonii strain BX0805 DNA.637_ctg0008, whole genome shotgun sequence 152,819
NZ_JACOQH010000009.1 Roseburia yibonii strain BX0805 DNA.637_ctg0009, whole genome shotgun sequence 108,440
NZ_JACOQH010000010.1 Roseburia yibonii strain BX0805 DNA.637_ctg0010, whole genome shotgun sequence 106,206
NZ_JACOQH010000011.1 Roseburia yibonii strain BX0805 DNA.637_ctg0011, whole genome shotgun sequence 76,384
NZ_JACOQH010000012.1 Roseburia yibonii strain BX0805 DNA.637_ctg0012, whole genome shotgun sequence 50,624
NZ_JACOQH010000013.1 Roseburia yibonii strain BX0805 DNA.637_ctg0013, whole genome shotgun sequence 28,265
NZ_JACOQH010000014.1 Roseburia yibonii strain BX0805 DNA.637_ctg0014, whole genome shotgun sequence 15,071
NZ_JACOQH010000015.1 Roseburia yibonii strain BX0805 DNA.637_ctg0015, whole genome shotgun sequence 11,148
NZ_JACOQH010000016.1 Roseburia yibonii strain BX0805 DNA.637_ctg0016, whole genome shotgun sequence 8,909
NZ_JACOQH010000017.1 Roseburia yibonii strain BX0805 DNA.637_ctg0017, whole genome shotgun sequence 1,723
NZ_JACOQH010000018.1 Roseburia yibonii strain BX0805 DNA.637_ctg0018, whole genome shotgun sequence 3,063
NZ_JACOQH010000019.1 Roseburia yibonii strain BX0805 DNA.637_ctg0019, whole genome shotgun sequence 3,930
NZ_JACOQH010000020.1 Roseburia yibonii strain BX0805 DNA.637_ctg0020, whole genome shotgun sequence 2,860
NZ_JACOQH010000021.1 Roseburia yibonii strain BX0805 DNA.637_ctg0028, whole genome shotgun sequence 1,036
NZ_JACOQH010000022.1 Roseburia yibonii strain BX0805 DNA.637_ctg0029, whole genome shotgun sequence 960
NZ_JACOQH010000023.1 Roseburia yibonii strain BX0805 DNA.637_ctg0038, whole genome shotgun sequence 825
NZ_JACOQH010000024.1 Roseburia yibonii strain BX0805 DNA.637_ctg0067, whole genome shotgun sequence 638
NZ_JACOQH010000025.1 Roseburia yibonii strain BX0805 DNA.637_ctg0104, whole genome shotgun sequence 568
NZ_JACOQH010000026.1 Roseburia yibonii strain BX0805 DNA.637_ctg0123, whole genome shotgun sequence 537
NZ_JACOQH010000027.1 Roseburia yibonii strain BX0805 DNA.637_ctg0141, whole genome shotgun sequence 465
NZ_JACOQH010000028.1 Roseburia yibonii strain BX0805 DNA.637_ctg0149, whole genome shotgun sequence 509

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory