fast.genomicscompare 6,575 genera of bacteria & archaea

 

UBA5868 sp014336955 K07

Genome identifier: GCF_014336955.1

NCBI assembly name: ASM1433695v1

GTDB taxonomy: Bacteria, Pseudomonadota, Gammaproteobacteria, Pseudomonadales, Cellvibrionaceae, UBA5868, UBA5868 sp014336955

NCBI taxonomy: Bacteria, Pseudomonadota, Gammaproteobacteria, Cellvibrionales, Cellvibrionaceae, Saccharophagus

Scaffolds: 19

Genes: 3,776 Protein-coding: 3,598 RNAs: 47 pseudogenes: 131

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_QRAI01000001.1 Saccharophagus sp. K07 contig_0000001, whole genome shotgun sequence 1,478,044
NZ_QRAI01000002.1 Saccharophagus sp. K07 contig_0000002, whole genome shotgun sequence 745,929
NZ_QRAI01000003.1 Saccharophagus sp. K07 contig_0000003, whole genome shotgun sequence 603,799
NZ_QRAI01000004.1 Saccharophagus sp. K07 contig_0000004, whole genome shotgun sequence 484,964
NZ_QRAI01000005.1 Saccharophagus sp. K07 contig_0000005, whole genome shotgun sequence 362,140
NZ_QRAI01000006.1 Saccharophagus sp. K07 contig_0000006, whole genome shotgun sequence 183,941
NZ_QRAI01000007.1 Saccharophagus sp. K07 contig_0000007, whole genome shotgun sequence 175,489
NZ_QRAI01000008.1 Saccharophagus sp. K07 contig_0000008, whole genome shotgun sequence 172,786
NZ_QRAI01000009.1 Saccharophagus sp. K07 contig_0000009, whole genome shotgun sequence 25,137
NZ_QRAI01000010.1 Saccharophagus sp. K07 contig_0000010, whole genome shotgun sequence 24,631
NZ_QRAI01000011.1 Saccharophagus sp. K07 contig_0000011, whole genome shotgun sequence 1,969
NZ_QRAI01000012.1 Saccharophagus sp. K07 contig_0000012, whole genome shotgun sequence 1,769
NZ_QRAI01000013.1 Saccharophagus sp. K07 contig_0000013, whole genome shotgun sequence 1,719
NZ_QRAI01000014.1 Saccharophagus sp. K07 contig_0000014, whole genome shotgun sequence 1,581
NZ_QRAI01000015.1 Saccharophagus sp. K07 contig_0000015, whole genome shotgun sequence 1,409
NZ_QRAI01000016.1 Saccharophagus sp. K07 contig_0000016, whole genome shotgun sequence 1,392
NZ_QRAI01000017.1 Saccharophagus sp. K07 contig_0000017, whole genome shotgun sequence 1,308
NZ_QRAI01000018.1 Saccharophagus sp. K07 contig_0000018, whole genome shotgun sequence 1,172
NZ_QRAI01000019.1 Saccharophagus sp. K07 contig_0000019, whole genome shotgun sequence 1,009

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory