fast.genomicscompare 6,575 genera of bacteria & archaea

 

Ligaoa zhengdingensis NSJ-31

Genome identifier: GCF_014384885.1

NCBI assembly name: ASM1438488v1

GTDB taxonomy: Bacteria, Bacillota_A, Clostridia, Oscillospirales, Ruminococcaceae, Ligaoa, Ligaoa zhengdingensis

NCBI taxonomy: Bacteria, Bacillota, Clostridia, Eubacteriales, Oscillospiraceae, Ligaoa, Ligaoa zhengdingensis

Scaffolds: 113

Genes: 2,804 Protein-coding: 2,639 RNAs: 60 pseudogenes: 105

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_JACRST010000001.1 Ligaoa zhengdingensis strain NSJ-31 L36_ctg001, whole genome shotgun sequence 523,793
NZ_JACRST010000002.1 Ligaoa zhengdingensis strain NSJ-31 L36_ctg002, whole genome shotgun sequence 203,875
NZ_JACRST010000003.1 Ligaoa zhengdingensis strain NSJ-31 L36_ctg003, whole genome shotgun sequence 169,613
NZ_JACRST010000004.1 Ligaoa zhengdingensis strain NSJ-31 L36_ctg004, whole genome shotgun sequence 165,923
NZ_JACRST010000005.1 Ligaoa zhengdingensis strain NSJ-31 L36_ctg005, whole genome shotgun sequence 155,056
NZ_JACRST010000006.1 Ligaoa zhengdingensis strain NSJ-31 L36_ctg006, whole genome shotgun sequence 120,253
NZ_JACRST010000007.1 Ligaoa zhengdingensis strain NSJ-31 L36_ctg007, whole genome shotgun sequence 107,987
NZ_JACRST010000008.1 Ligaoa zhengdingensis strain NSJ-31 L36_ctg008, whole genome shotgun sequence 101,557
NZ_JACRST010000009.1 Ligaoa zhengdingensis strain NSJ-31 L36_ctg009, whole genome shotgun sequence 100,118
NZ_JACRST010000010.1 Ligaoa zhengdingensis strain NSJ-31 L36_ctg010, whole genome shotgun sequence 93,089
NZ_JACRST010000011.1 Ligaoa zhengdingensis strain NSJ-31 L36_ctg011, whole genome shotgun sequence 91,650
NZ_JACRST010000012.1 Ligaoa zhengdingensis strain NSJ-31 L36_ctg012, whole genome shotgun sequence 86,671
NZ_JACRST010000013.1 Ligaoa zhengdingensis strain NSJ-31 L36_ctg013, whole genome shotgun sequence 77,954
NZ_JACRST010000014.1 Ligaoa zhengdingensis strain NSJ-31 L36_ctg014, whole genome shotgun sequence 67,550
NZ_JACRST010000015.1 Ligaoa zhengdingensis strain NSJ-31 L36_ctg015, whole genome shotgun sequence 62,986
NZ_JACRST010000016.1 Ligaoa zhengdingensis strain NSJ-31 L36_ctg016, whole genome shotgun sequence 59,854
NZ_JACRST010000017.1 Ligaoa zhengdingensis strain NSJ-31 L36_ctg017, whole genome shotgun sequence 57,508
NZ_JACRST010000018.1 Ligaoa zhengdingensis strain NSJ-31 L36_ctg018, whole genome shotgun sequence 47,526
NZ_JACRST010000019.1 Ligaoa zhengdingensis strain NSJ-31 L36_ctg019, whole genome shotgun sequence 41,510
NZ_JACRST010000020.1 Ligaoa zhengdingensis strain NSJ-31 L36_ctg020, whole genome shotgun sequence 37,671
NZ_JACRST010000021.1 Ligaoa zhengdingensis strain NSJ-31 L36_ctg021, whole genome shotgun sequence 36,280
NZ_JACRST010000022.1 Ligaoa zhengdingensis strain NSJ-31 L36_ctg022, whole genome shotgun sequence 35,459
NZ_JACRST010000023.1 Ligaoa zhengdingensis strain NSJ-31 L36_ctg023, whole genome shotgun sequence 35,088
NZ_JACRST010000024.1 Ligaoa zhengdingensis strain NSJ-31 L36_ctg024, whole genome shotgun sequence 28,862
NZ_JACRST010000025.1 Ligaoa zhengdingensis strain NSJ-31 L36_ctg025, whole genome shotgun sequence 15,285
NZ_JACRST010000026.1 Ligaoa zhengdingensis strain NSJ-31 L36_ctg026, whole genome shotgun sequence 8,505
NZ_JACRST010000027.1 Ligaoa zhengdingensis strain NSJ-31 L36_ctg027, whole genome shotgun sequence 23,314
NZ_JACRST010000028.1 Ligaoa zhengdingensis strain NSJ-31 L36_ctg028, whole genome shotgun sequence 21,664
NZ_JACRST010000029.1 Ligaoa zhengdingensis strain NSJ-31 L36_ctg029, whole genome shotgun sequence 20,539
NZ_JACRST010000030.1 Ligaoa zhengdingensis strain NSJ-31 L36_ctg030, whole genome shotgun sequence 20,078
NZ_JACRST010000031.1 Ligaoa zhengdingensis strain NSJ-31 L36_ctg031, whole genome shotgun sequence 18,876
NZ_JACRST010000032.1 Ligaoa zhengdingensis strain NSJ-31 L36_ctg032, whole genome shotgun sequence 18,860
NZ_JACRST010000033.1 Ligaoa zhengdingensis strain NSJ-31 L36_ctg033, whole genome shotgun sequence 18,732
NZ_JACRST010000034.1 Ligaoa zhengdingensis strain NSJ-31 L36_ctg034, whole genome shotgun sequence 17,580
NZ_JACRST010000035.1 Ligaoa zhengdingensis strain NSJ-31 L36_ctg035, whole genome shotgun sequence 15,816
NZ_JACRST010000036.1 Ligaoa zhengdingensis strain NSJ-31 L36_ctg036, whole genome shotgun sequence 15,258
NZ_JACRST010000037.1 Ligaoa zhengdingensis strain NSJ-31 L36_ctg037, whole genome shotgun sequence 12,686
NZ_JACRST010000038.1 Ligaoa zhengdingensis strain NSJ-31 L36_ctg038, whole genome shotgun sequence 11,391
NZ_JACRST010000039.1 Ligaoa zhengdingensis strain NSJ-31 L36_ctg039, whole genome shotgun sequence 11,006
NZ_JACRST010000040.1 Ligaoa zhengdingensis strain NSJ-31 L36_ctg040, whole genome shotgun sequence 10,436
NZ_JACRST010000041.1 Ligaoa zhengdingensis strain NSJ-31 L36_ctg041, whole genome shotgun sequence 9,991
NZ_JACRST010000042.1 Ligaoa zhengdingensis strain NSJ-31 L36_ctg042, whole genome shotgun sequence 8,792
NZ_JACRST010000043.1 Ligaoa zhengdingensis strain NSJ-31 L36_ctg043, whole genome shotgun sequence 7,737
NZ_JACRST010000044.1 Ligaoa zhengdingensis strain NSJ-31 L36_ctg044, whole genome shotgun sequence 7,672
NZ_JACRST010000045.1 Ligaoa zhengdingensis strain NSJ-31 L36_ctg045, whole genome shotgun sequence 7,576
NZ_JACRST010000046.1 Ligaoa zhengdingensis strain NSJ-31 L36_ctg047, whole genome shotgun sequence 6,670
NZ_JACRST010000047.1 Ligaoa zhengdingensis strain NSJ-31 L36_ctg049, whole genome shotgun sequence 6,450
NZ_JACRST010000048.1 Ligaoa zhengdingensis strain NSJ-31 L36_ctg050, whole genome shotgun sequence 6,425
NZ_JACRST010000049.1 Ligaoa zhengdingensis strain NSJ-31 L36_ctg051, whole genome shotgun sequence 6,308
NZ_JACRST010000050.1 Ligaoa zhengdingensis strain NSJ-31 L36_ctg052, whole genome shotgun sequence 6,173
NZ_JACRST010000051.1 Ligaoa zhengdingensis strain NSJ-31 L36_ctg053, whole genome shotgun sequence 6,151
NZ_JACRST010000052.1 Ligaoa zhengdingensis strain NSJ-31 L36_ctg054, whole genome shotgun sequence 5,648
NZ_JACRST010000053.1 Ligaoa zhengdingensis strain NSJ-31 L36_ctg055, whole genome shotgun sequence 5,136
NZ_JACRST010000054.1 Ligaoa zhengdingensis strain NSJ-31 L36_ctg056, whole genome shotgun sequence 4,892
NZ_JACRST010000055.1 Ligaoa zhengdingensis strain NSJ-31 L36_ctg057, whole genome shotgun sequence 4,623
NZ_JACRST010000056.1 Ligaoa zhengdingensis strain NSJ-31 L36_ctg058, whole genome shotgun sequence 3,991
NZ_JACRST010000057.1 Ligaoa zhengdingensis strain NSJ-31 L36_ctg059, whole genome shotgun sequence 3,863
NZ_JACRST010000058.1 Ligaoa zhengdingensis strain NSJ-31 L36_ctg060, whole genome shotgun sequence 3,551
NZ_JACRST010000059.1 Ligaoa zhengdingensis strain NSJ-31 L36_ctg061, whole genome shotgun sequence 3,411
NZ_JACRST010000060.1 Ligaoa zhengdingensis strain NSJ-31 L36_ctg062, whole genome shotgun sequence 3,188
NZ_JACRST010000061.1 Ligaoa zhengdingensis strain NSJ-31 L36_ctg064, whole genome shotgun sequence 2,725
NZ_JACRST010000062.1 Ligaoa zhengdingensis strain NSJ-31 L36_ctg065, whole genome shotgun sequence 2,581
NZ_JACRST010000063.1 Ligaoa zhengdingensis strain NSJ-31 L36_ctg066, whole genome shotgun sequence 2,581
NZ_JACRST010000064.1 Ligaoa zhengdingensis strain NSJ-31 L36_ctg067, whole genome shotgun sequence 2,511
NZ_JACRST010000065.1 Ligaoa zhengdingensis strain NSJ-31 L36_ctg069, whole genome shotgun sequence 2,409
NZ_JACRST010000066.1 Ligaoa zhengdingensis strain NSJ-31 L36_ctg071, whole genome shotgun sequence 2,165
NZ_JACRST010000067.1 Ligaoa zhengdingensis strain NSJ-31 L36_ctg072, whole genome shotgun sequence 2,165
NZ_JACRST010000068.1 Ligaoa zhengdingensis strain NSJ-31 L36_ctg073, whole genome shotgun sequence 2,140
NZ_JACRST010000069.1 Ligaoa zhengdingensis strain NSJ-31 L36_ctg075, whole genome shotgun sequence 1,967
NZ_JACRST010000070.1 Ligaoa zhengdingensis strain NSJ-31 L36_ctg076, whole genome shotgun sequence 1,958
NZ_JACRST010000071.1 Ligaoa zhengdingensis strain NSJ-31 L36_ctg077, whole genome shotgun sequence 1,953
NZ_JACRST010000072.1 Ligaoa zhengdingensis strain NSJ-31 L36_ctg078, whole genome shotgun sequence 1,953
NZ_JACRST010000073.1 Ligaoa zhengdingensis strain NSJ-31 L36_ctg080, whole genome shotgun sequence 1,887
NZ_JACRST010000074.1 Ligaoa zhengdingensis strain NSJ-31 L36_ctg085, whole genome shotgun sequence 1,629
NZ_JACRST010000075.1 Ligaoa zhengdingensis strain NSJ-31 L36_ctg086, whole genome shotgun sequence 1,623
NZ_JACRST010000076.1 Ligaoa zhengdingensis strain NSJ-31 L36_ctg087, whole genome shotgun sequence 1,600
NZ_JACRST010000077.1 Ligaoa zhengdingensis strain NSJ-31 L36_ctg088, whole genome shotgun sequence 1,526
NZ_JACRST010000078.1 Ligaoa zhengdingensis strain NSJ-31 L36_ctg089, whole genome shotgun sequence 1,482
NZ_JACRST010000079.1 Ligaoa zhengdingensis strain NSJ-31 L36_ctg090, whole genome shotgun sequence 1,448
NZ_JACRST010000080.1 Ligaoa zhengdingensis strain NSJ-31 L36_ctg095, whole genome shotgun sequence 1,255
NZ_JACRST010000081.1 Ligaoa zhengdingensis strain NSJ-31 L36_ctg097, whole genome shotgun sequence 1,199
NZ_JACRST010000082.1 Ligaoa zhengdingensis strain NSJ-31 L36_ctg098, whole genome shotgun sequence 1,172
NZ_JACRST010000083.1 Ligaoa zhengdingensis strain NSJ-31 L36_ctg102, whole genome shotgun sequence 1,111
NZ_JACRST010000084.1 Ligaoa zhengdingensis strain NSJ-31 L36_ctg104, whole genome shotgun sequence 1,049
NZ_JACRST010000085.1 Ligaoa zhengdingensis strain NSJ-31 L36_ctg105, whole genome shotgun sequence 1,029
NZ_JACRST010000086.1 Ligaoa zhengdingensis strain NSJ-31 L36_ctg114, whole genome shotgun sequence 937
NZ_JACRST010000087.1 Ligaoa zhengdingensis strain NSJ-31 L36_ctg115, whole genome shotgun sequence 935
NZ_JACRST010000088.1 Ligaoa zhengdingensis strain NSJ-31 L36_ctg117, whole genome shotgun sequence 931
NZ_JACRST010000089.1 Ligaoa zhengdingensis strain NSJ-31 L36_ctg121, whole genome shotgun sequence 922
NZ_JACRST010000090.1 Ligaoa zhengdingensis strain NSJ-31 L36_ctg122, whole genome shotgun sequence 915
NZ_JACRST010000091.1 Ligaoa zhengdingensis strain NSJ-31 L36_ctg126, whole genome shotgun sequence 906
NZ_JACRST010000092.1 Ligaoa zhengdingensis strain NSJ-31 L36_ctg127, whole genome shotgun sequence 905
NZ_JACRST010000093.1 Ligaoa zhengdingensis strain NSJ-31 L36_ctg128, whole genome shotgun sequence 905
NZ_JACRST010000094.1 Ligaoa zhengdingensis strain NSJ-31 L36_ctg155, whole genome shotgun sequence 833
NZ_JACRST010000095.1 Ligaoa zhengdingensis strain NSJ-31 L36_ctg168, whole genome shotgun sequence 757
NZ_JACRST010000096.1 Ligaoa zhengdingensis strain NSJ-31 L36_ctg173, whole genome shotgun sequence 740
NZ_JACRST010000097.1 Ligaoa zhengdingensis strain NSJ-31 L36_ctg176, whole genome shotgun sequence 735
NZ_JACRST010000098.1 Ligaoa zhengdingensis strain NSJ-31 L36_ctg183, whole genome shotgun sequence 694
NZ_JACRST010000099.1 Ligaoa zhengdingensis strain NSJ-31 L36_ctg184, whole genome shotgun sequence 691
NZ_JACRST010000100.1 Ligaoa zhengdingensis strain NSJ-31 L36_ctg186, whole genome shotgun sequence 678
NZ_JACRST010000101.1 Ligaoa zhengdingensis strain NSJ-31 L36_ctg189, whole genome shotgun sequence 670
NZ_JACRST010000102.1 Ligaoa zhengdingensis strain NSJ-31 L36_ctg199, whole genome shotgun sequence 619
NZ_JACRST010000103.1 Ligaoa zhengdingensis strain NSJ-31 L36_ctg200, whole genome shotgun sequence 619
NZ_JACRST010000104.1 Ligaoa zhengdingensis strain NSJ-31 L36_ctg206, whole genome shotgun sequence 597
NZ_JACRST010000105.1 Ligaoa zhengdingensis strain NSJ-31 L36_ctg207, whole genome shotgun sequence 597
NZ_JACRST010000106.1 Ligaoa zhengdingensis strain NSJ-31 L36_ctg208, whole genome shotgun sequence 591
NZ_JACRST010000107.1 Ligaoa zhengdingensis strain NSJ-31 L36_ctg213, whole genome shotgun sequence 583
NZ_JACRST010000108.1 Ligaoa zhengdingensis strain NSJ-31 L36_ctg214, whole genome shotgun sequence 583
NZ_JACRST010000109.1 Ligaoa zhengdingensis strain NSJ-31 L36_ctg233, whole genome shotgun sequence 532
NZ_JACRST010000110.1 Ligaoa zhengdingensis strain NSJ-31 L36_ctg234, whole genome shotgun sequence 532
NZ_JACRST010000111.1 Ligaoa zhengdingensis strain NSJ-31 L36_ctg244, whole genome shotgun sequence 520
NZ_JACRST010000112.1 Ligaoa zhengdingensis strain NSJ-31 L36_ctg248, whole genome shotgun sequence 518
NZ_JACRST010000113.1 Ligaoa zhengdingensis strain NSJ-31 L36_ctg255, whole genome shotgun sequence 507

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory